| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0186 |
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| Symbol | |
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| ID | 5056622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 210543 |
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| End bp | 212369 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640472456 |
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| Product | VanW family protein |
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| Protein accession | YP_001157049 |
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| Protein GI | 145592752 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.953695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGTGA CCCTGTACGG CGACAAGGTT CCGCCCGCCG ACGACCGGCC CACCGTGCAG
GTAACCGCGG TGCAGTGGCC TGTTGAGGAG GCGGAGAAAC CCACCAAACG GGGTGGAAAG
TGGTCCTTTC CACCTGGCGG GAAGTGGTCC CGCCGCACCT GGCTGCTCGC CGCCGGGGTC
ACCACCGCTG TACTCGCCTC CGCAGTCGGC ATCGGTGCCT ACGCGTACGC CGGTGACGTA
CCCCGTGGAA CGACGGTCCT CGGCACGGAG CTCAGCGGCT ACAGCCAGGC AGCGGCCGTC
GAGGAGCTGC GCGCCGCGGT GGAGCGACAG GCCGCCGAGC TGAACGCACC CCTGCCGGTG
GTCGTCGGCG ACAACACGGC GGAACTGGTG CCGGCCGAGG TGGGTCTCCG GGTTGACGTG
GAGGCCACCG TGGCGGCCGC CATGCAGGTG GAGGCGCACG TCTTCGAACG ACTCGTCGGC
TCCCGCACCG TGCCACCGGT GGTGACGGTG GACGTGGACC AGCTCGACGC GGCACTCAAG
AAGGTCCTGG GGGACGACGG CCGCACGATG ACCATGCCGG CGATCACCTG GAGCGGCCTC
ACCCCGAAGG CAACTCACCC GAAGCCAAGC CTGGAGCTCG ACCCCGAGCG CTCCGCGCAG
GCGGTGCGGG AGGGCTGGCT GAGCGGTGAG CCAGTCACCG TCCCACTGGC CCAGATACAC
CCGGTCACCA CCGCCGAGGA GGTCGACCAG ATGGTGGCCG AGCTGGCGAG GCCGGCCGTC
GCGGCCCCGG TGACCCTGAC GACGGACCAG GGCTCGATGA GCATTCCGCC GGCGGCGATC
GCAAAGAGTC TGGTGTTCAC CGCCGACGAT GCCGGCGCGT TGTCGGCGAA AGTCGATGTC
GAGAAGCTGC GCACCGCGCT CGGCGACGAC CTGGCCAAGG TCGAGGTGAC CCCGAAAAAC
GCTCGGATGA CGCTCACCGA CGGCAAGCCA AAGATCATCG AAAGCCGGGA CGGGAAGAAG
CTGGACACCA GCAGCCTTGG TGAGGCCCTG CTCGCGGTCC TACCGCAGTC GGACGACCGC
CGGGTGACCG GCACGCTCAC GACGGCGAAG CCGGAGCTCA CCACGGAGAA GCTGGCGGGT
CTGGGTATCA GGGAGCAGGT GTCGACCTTC ACCACCCAGT TCTCCGGCGG ACTCTCCTCG
CCGCGCAGCC AGAACATCAT CACCGCCGCC AAAGACGTTG ACAATACGCT GGTGCTACCC
GGCGAGACGT TCTCCCTGAA CGGGCACACC GGCGACCGAA ACTACGCAAA GGGCTACAAG
GACGCTCCGG TCATTCTCAA CGGCAAGCTC GTACCGGGCG TCGGGGGCGG TGTCTCGCAG
TTCACCACGA CGCTGTTCAA CGCCACCTAC TATGCGGGGC TCGAGGACGT CGAGCACAAG
CCACACTCGT ACTATTTCAG CCGCTACCCG GCGGTCATCG AGTCCACAAT CTTCTACCCG
GAGCTCGACT TCAAATTCCG CAACAACACC GAGTACGGAC TCTTGATCGA TACCTCGTAC
ACGTCGAACA AGATCACCGT TTCGATCTGG AGTACGAAGA TCTGGGATAA GGTAAAGACG
GAATACGGCC CCCGTAAAAA CATCACCAAG CCAAAGACCG TCCATCTGGA GCCAGGCCCG
AACTGCATCG CCGCCAGCGG CAGCGATGGG TTCAGCCAGA GCGCCTACCG AGTGTTCTAC
AAGGACGGTA AGGAGGTAAA GCGGGAGAAG TTCAGTTGGC GCTACGCCGC GGAGCCACGC
TTCATCTGCG GCCCAAAGCC CTCCTGA
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| Protein sequence | MTVTLYGDKV PPADDRPTVQ VTAVQWPVEE AEKPTKRGGK WSFPPGGKWS RRTWLLAAGV
TTAVLASAVG IGAYAYAGDV PRGTTVLGTE LSGYSQAAAV EELRAAVERQ AAELNAPLPV
VVGDNTAELV PAEVGLRVDV EATVAAAMQV EAHVFERLVG SRTVPPVVTV DVDQLDAALK
KVLGDDGRTM TMPAITWSGL TPKATHPKPS LELDPERSAQ AVREGWLSGE PVTVPLAQIH
PVTTAEEVDQ MVAELARPAV AAPVTLTTDQ GSMSIPPAAI AKSLVFTADD AGALSAKVDV
EKLRTALGDD LAKVEVTPKN ARMTLTDGKP KIIESRDGKK LDTSSLGEAL LAVLPQSDDR
RVTGTLTTAK PELTTEKLAG LGIREQVSTF TTQFSGGLSS PRSQNIITAA KDVDNTLVLP
GETFSLNGHT GDRNYAKGYK DAPVILNGKL VPGVGGGVSQ FTTTLFNATY YAGLEDVEHK
PHSYYFSRYP AVIESTIFYP ELDFKFRNNT EYGLLIDTSY TSNKITVSIW STKIWDKVKT
EYGPRKNITK PKTVHLEPGP NCIAASGSDG FSQSAYRVFY KDGKEVKREK FSWRYAAEPR
FICGPKPS
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