| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0154 |
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| Symbol | |
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| ID | 5056587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 168245 |
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| End bp | 169825 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472421 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001157017 |
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| Protein GI | 145592720 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.66132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCGAG GCGATGGCCG GTTGAGCCAC GACCTTGACC CCCAGCGTCC CGGCCCCCAG
GACGCCTGTG GCGTCTTTGG TGTCTGGGCG CCCGGCGAGG AGGTCGCCAA TCTGACCTAC
TTTGGGCTGT ACGCGTTGCA GCACCGGGGG CAGGAGGCGG CTGGCATTGC CGTCAGTGAC
GGCACGGGCG TGGTGGTCTA CAAAGACCTT GGCCTGGTAG CCCAGGTCTT CGACGAGCCG
ACCCTGGCCA GCCTGCGCGG GCACGTGGCG ATCGGCCACG CGCGTTACTC GACCACTGGT
GGCTCCACCT GGGAGAACGC CCAGCCGACC ATCCGATCCA CCGCCTCCGG CACGACGATC
GCTCTGGCCC ACAACGGCAA CCTGGTCAAC TCGGCCGAGC TGTACCGGGA GGCCGGCGAG
CGGGCGTTGG CCGGTGACGG GGCCACCAGC GACACCTCGC TGGTGACCAT GCTGTTGGCC
AGCCGACCCG ACCTGTCGGT GGAGGCCGCC GCGCTGGAGG TGTTGCCGCA GCTACAGGGA
GCGTTCAGCT TCGTCTTCAT GGACGAGTCG ACGCTCTACG CGGCCCGCGA TCAGTACGGG
GTCCGTCCGC TGGTGTTGGG CCGGTTGGAG CGCGGTTGGG TCGTGGCCAG CGAGACGGCC
GCGCTCGACA TCGTCGGTGC CAGCGTGGTC CGGGAGGTCG AGCCGGGCGA GTTGATCGCG
ATCGACGAGG ACGGGCTCCG CTCTGCCCGC TTTGCCGCAC CGGAGCCGAA GGGCTGCCTC
TTCGAGTACG TCTACGTCGC CCGTCCGGAC GCCACTATCG CCGGCCGGAA CGTGCACGCG
GCACGCGTGC AGATCGGCCG TCAGCTCGCT CGGGAGCATG AGGTAGAGGC CGATCTGGTG
ATCCCCGTGC CTGAGTCGGG CACCCCCGCC GCGATCGGCT ACGCGGCAGA GTCCGGCATT
ACCTTCGGGG CCGGGTTGAT GAAGAATCCG TACGTCGGGC GGACCTTCAT CCAGCCGTCG
CAGACGCTGC GGCAGCTCGG TATTCGACTC AAGCTCAACC CGCTGCGCGA GAACGTACGG
GGTAAGAGGC TGGTCGTCGT GGACGACTCC ATCGTCCGCG GCAACACCCA GCGGGCCATT
GTGCGAATGC TCCGCGAGGC CGGTGCGCTG GAGGTGCACG TCCGGATCTC TTCGCCGCCG
GTTGCCTGGC CATGCTTCTA CGGCATCGAC TTCGCGACCC GCGCCGAGCT GCTCGCCAAC
GGCCTGGACA ACGAGGGCGT CCGGCGGTCG ATCGGCGCCG ACACGCTCGG CTACGTGTCG
CTCAGCGGTC TGATCGCGGC CACCGAGCAA CCGAAGAGCC GGCTCTGCCG TGCGTGCTTC
GACGGCGAGT ATCCGATCGA ACTGCCCGCT GACAGCCTGA TCGGTAAGCA CGTGCTGGAG
GGGGTCGGTC GGCGGGTCAC CGCCGAGTCC TCCGAACCGC ACGCCATTCC GTTCGTCGCC
GCCCACAGCG GTTACGACGC GTTCAGCTCG GCGCGGGTGC CGCGCCCCGA CCCGGAAGAG
CCGACCACCC ACATCCGGTA G
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| Protein sequence | MPRGDGRLSH DLDPQRPGPQ DACGVFGVWA PGEEVANLTY FGLYALQHRG QEAAGIAVSD
GTGVVVYKDL GLVAQVFDEP TLASLRGHVA IGHARYSTTG GSTWENAQPT IRSTASGTTI
ALAHNGNLVN SAELYREAGE RALAGDGATS DTSLVTMLLA SRPDLSVEAA ALEVLPQLQG
AFSFVFMDES TLYAARDQYG VRPLVLGRLE RGWVVASETA ALDIVGASVV REVEPGELIA
IDEDGLRSAR FAAPEPKGCL FEYVYVARPD ATIAGRNVHA ARVQIGRQLA REHEVEADLV
IPVPESGTPA AIGYAAESGI TFGAGLMKNP YVGRTFIQPS QTLRQLGIRL KLNPLRENVR
GKRLVVVDDS IVRGNTQRAI VRMLREAGAL EVHVRISSPP VAWPCFYGID FATRAELLAN
GLDNEGVRRS IGADTLGYVS LSGLIAATEQ PKSRLCRACF DGEYPIELPA DSLIGKHVLE
GVGRRVTAES SEPHAIPFVA AHSGYDAFSS ARVPRPDPEE PTTHIR
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