Gene Strop_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0125 
SymbolpyrE 
ID5056558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp134691 
End bp135230 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID640472392 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001156988 
Protein GI145592691 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGACC ACGACGACCT GCGTAAATTC ATCACCGACC TGGCAGTGGT CCATGGTCGG 
GTGGTGCTGT CCTCGGGGCG CGCGGCGGAC TGGTATGTGG ACCTGCGGCG CGTAACGCTG
CATCACGAGG CCGCCCCGTT GGTGGGCCGG GTGCTGCGGG AGCTGACTGC CGACTGGGCG
TACGACGCGG TGGGTGGGCT CACCCTCGGC GCCGACCCGA TCGCGCTGTC GATGTTGCAC
GCCACCACTG GTGCCGACCG TCCGTTGGAC GCCTTCGTGG TTCGTAAGGC GGGTAAGGCG
CACGGGCTAC AACGCCGGAT CGAGGGGCCC GACGTGGCCG GGCGTCGGGT GCTCGCAGTG
GAAGACACCT CCACCACGGG CCAGAGCGTG TTGACTGCTG TCGAGGCCCT ACGTGAGGCC
GGGGCCGAGG TGATGGGGGT AGCGGTTATT GTTGATCGAG GTGCCGGCGC CGCGGTCCGA
GCCGCCGGAC TGCCGTACCG GGCTGCCTAT ACGTTGGCTG ACCTCGGCCT TGTGGCGTAA
 
Protein sequence
MGDHDDLRKF ITDLAVVHGR VVLSSGRAAD WYVDLRRVTL HHEAAPLVGR VLRELTADWA 
YDAVGGLTLG ADPIALSMLH ATTGADRPLD AFVVRKAGKA HGLQRRIEGP DVAGRRVLAV
EDTSTTGQSV LTAVEALREA GAEVMGVAVI VDRGAGAAVR AAGLPYRAAY TLADLGLVA