Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0109 |
Symbol | |
ID | 5056542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 117686 |
End bp | 118861 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472376 |
Product | pyruvate dehydrogenase (acetyl-transferring) |
Protein accession | YP_001156972 |
Protein GI | 145592675 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG GCGACCCCGG GGTCAACACC CGCGGCCGGC GGGCCGTACC CCGATCCAGG AAGGGCGCGA CCGGCGACCC CGAGCTGGTG CAGCTACTCA CCCCCGAAGG TGAGCGCATC GAGAGTGTGA CCGGGCCGGA CGGCACCGAA TACCGGGTCG ACTTCACCGA CGAGGAGTAC CGCGGCTTCT ATCGGGACCT GGTGCTGGTG CGAAAGCTGG ACGCCGAGGC GACCGCCCTT CAGCGGCAGG GCGAGCTGGG CCTCTGGGCG AGCCTGCTCG GCCAGGAGGC GGCCCAGGTC GGTTCCGGCC GGGCACTGCG TACGCAGGAC ATGGCCTTCC CGACCTACCG GGAACACGGC GTCCTCTACT GCCGGGGTAT CGACCCGATC ATGCCGCTGG GCCTGTTCCG CGGAGTTGAC CAGGGCGGCT GGGACCCGAA CGAGTTCAAG TTCAACATGT ACACGATCGT GATCGGGGCA CAGGCCCTGC ACGCGACCGG GTACGCCATG GGCATCACCA TGGACGGCAA GACCGGCACC GACGAGGGCG AGGCGGTGAT CGCCTACTTC GGCGACGGCG CCACCAGCCA GGGCGATGTC AACGAGGCGT TCGTGTGGGC CAGCGTCTTC AACGCGCCGA TGGTCTTCTT CTGCCAGAAC AACCAGTACG CCATCTCGGA GCCGCTGGAG CGCCAGACCC GCATCCCGCT CTACCGGCGG GCCGCCGGCT TCGGCTTCCC CGGCCTTCGG GTGGACGGCA ACGACGTGCT GGCCACCTAC GCGGTGACCC GGCACGCGCT GGACAACGCG CGGCACGGGC AGGGCCCGAG CCTGATCGAG GCGTACACCT ATCGGATGGG GGCGCACACC ACCTCCGACG ACCCCACCCG GTACCGGATC GCCAGCGAGG TCGAGGCCTG GCAGGCCAAG GATCCGATCG CCCGGATGAA GACCTTCCTG GAGAAGCAGA AGATCGCCGA CGACGGCTTC TTCGCCGAGG TGGACGAGCA GGCCAAGCGC GAGTCGGTGC ACCTGCGCGA GCGGGTGCTG GAGATGCCGA ACCCGGAGCC GAGCAGCATG TTCGACCACG TCTACCCCAA CGGATCGCCC CTGGTCGACC AGCAGCGGGC GCAGTTCAAC CAGTACCTGG AGTCGTTCGA GGGGAGCGCG CACTGA
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Protein sequence | MAKGDPGVNT RGRRAVPRSR KGATGDPELV QLLTPEGERI ESVTGPDGTE YRVDFTDEEY RGFYRDLVLV RKLDAEATAL QRQGELGLWA SLLGQEAAQV GSGRALRTQD MAFPTYREHG VLYCRGIDPI MPLGLFRGVD QGGWDPNEFK FNMYTIVIGA QALHATGYAM GITMDGKTGT DEGEAVIAYF GDGATSQGDV NEAFVWASVF NAPMVFFCQN NQYAISEPLE RQTRIPLYRR AAGFGFPGLR VDGNDVLATY AVTRHALDNA RHGQGPSLIE AYTYRMGAHT TSDDPTRYRI ASEVEAWQAK DPIARMKTFL EKQKIADDGF FAEVDEQAKR ESVHLRERVL EMPNPEPSSM FDHVYPNGSP LVDQQRAQFN QYLESFEGSA H
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