| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0108 |
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| Symbol | |
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| ID | 5056541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 116697 |
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| End bp | 117686 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472375 |
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| Product | transketolase, central region |
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| Protein accession | YP_001156971 |
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| Protein GI | 145592674 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGG AGACCCTCAC CCTCGGCAAG GCCCTCAACG CCGGAATGCG CAAGGCCCTG
GAGAGCGACC CGAAGGTCGT CATCATGGGC GAGGACGTCG GCAAGCTCGG CGGCGTCTTC
CGGATCACCG ACGGGCTCCA GAAGGACTTC GGTGACCAGC GGGTGATCGA CACCCCGCTC
GCCGAGTCGG GCATCATCGG CACCGCGATC GGCCTGGCCA TCCGAGGCTA CCGGCCGGTT
TGCGAGATCC AGTTCGACGG CTTCGTCTAC CCGGCGTACG ACCAGATCGT GTCGCAGGTG
GCAAAGATGC ACTACCGCTC CCGCGGCAAG CTGAAAATCC CCATGGTGAT CCGTATTCCG
TTCGGTGGCG GCATCGGGGC GGTGGAGCAC CACTCGGAGT CGCCGGAGGC GTACTTCTCC
CACACCGCCG GGCTCAAGGT CGCCACCTGC GCCAACCCGC AGGACGCGTA CGTGATGATC
CAGCAGGCCA TCGCGTCGGA CGACCCGATT GTGTTCCTCG AACCCAAGCG CCGCTACTGG
GAGAAGGGTC CGGTCGAGAT CGACCAGCCG CTGCCGGAGG CCTACCCGCT GCAGGCCGCC
CGGGTCGCGC GGCCGGGCAC CGACGCGACC CTGATCGCGT ACGGGCCGAT GGTGCGCACC
TGCCTGGACG CGGCGACCGC CGCCGCCGAG GACGGCCGCG AGCTGGAGGT CATCGACCTG
CGCACGCTCG CCCCGCTGGA CCTGGGTCTG GTGTACGAGT CGGTACGCCG CACCGGTCGG
GCCGTCGTGG TGCACGAGGC GCCGTCGAAC ATCGGCCTCG GGGCCGAGGT CGCGGCCCGG
ATCACCGAGG AGTGCTTCTA CTCCCTGGAA TCTCCGGTGC TGCGGGTGAC CGGCTTCGAC
ATCCCCTACC CGGCCTCCCG GGTGGAGGAG GAGTACCTGC CCGACCTCGA CCGGGTGCTC
GACGCCGTCG ACCGCACCTT CGGCTGGTGA
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| Protein sequence | MATETLTLGK ALNAGMRKAL ESDPKVVIMG EDVGKLGGVF RITDGLQKDF GDQRVIDTPL
AESGIIGTAI GLAIRGYRPV CEIQFDGFVY PAYDQIVSQV AKMHYRSRGK LKIPMVIRIP
FGGGIGAVEH HSESPEAYFS HTAGLKVATC ANPQDAYVMI QQAIASDDPI VFLEPKRRYW
EKGPVEIDQP LPEAYPLQAA RVARPGTDAT LIAYGPMVRT CLDAATAAAE DGRELEVIDL
RTLAPLDLGL VYESVRRTGR AVVVHEAPSN IGLGAEVAAR ITEECFYSLE SPVLRVTGFD
IPYPASRVEE EYLPDLDRVL DAVDRTFGW
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