| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0092 |
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| Symbol | |
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| ID | 5056525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 100075 |
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| End bp | 101013 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472359 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001156955 |
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| Protein GI | 145592658 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACGG TCGTCGTGCT CGCTTTGCCG GATGTGATTG CCTTTGATCT GGCCACCCCG
ATCGAGACGT TCGGACGTGT CCGCCTGCCG GACGGCCGAC CGGGGTACCG GGTCCTCGTC
GCAGGGCCCG ACGATGTCGT CGACGCCGGG CCGGTGCGGC TGGCAGTCAG CGAGCAGCTG
GATGCGCTCG ATCGCGCCGA CCTGGTCGTG GTGCCCGGCC GCAACGACCC CTTGCGACCC
TCCCCGCCCT CGGTGCTCAC AGCCCTGCGT GCGGCCGCGA CCAACGGCAC TCGCGTCGCC
TCCATCTGCG TCGGAGCATT CACGCTGGCA GAGGCAGGAC TACTCGACAA CATGCGGGCC
ACGACCCACT GGCTCGCCGC AGAACACCTT GCACGCAAAC ACCCGTCGAT TCAGGTGGAC
CCCGACGTGC TCTACATCGA CAACGGCAGC ATTCTCACCT CTGCCGGTGC CGCGTCCGGG
CTGGACCTGT GCCTGCACGT GATTCATACC GACTACGGTG CGGCGGTGGC CGCAGATGCC
GCACGCCTCG CCGTGGCCCC ACTGCACCGA AGCGGCGGAC AGGCGCAGTA CATTCTGCGG
AACCGGCCGC CCCTGCGAAC CTCAACCCTC GAACCCGTCC TCGCCTGGAT CGAGGCCAAC
GCGCATCGGG CCCTCACGCT CGCCGACCTC GCCGCCGCCG CGAGCATGAG CGCACGCACC
CTGACCAGGC GATTCGCCGT CGAGACCAGA CAGAGCCCGA TGCAATGGGT CGCCGGTGTC
CGGATTCGTC ACGCCCAGGA GCTTCTGGAA ACCACCGACT ACACAATCGA CCGCGTCGCA
AACCACACCG GATTCACCAC CACGAGCAAC TTTCGTGCGC AGTTCCAGGA GGTCGTCGGC
ACCACACCAG GGGCCTATCG CAGAACCTTC CGGCTGTGA
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| Protein sequence | MYTVVVLALP DVIAFDLATP IETFGRVRLP DGRPGYRVLV AGPDDVVDAG PVRLAVSEQL
DALDRADLVV VPGRNDPLRP SPPSVLTALR AAATNGTRVA SICVGAFTLA EAGLLDNMRA
TTHWLAAEHL ARKHPSIQVD PDVLYIDNGS ILTSAGAASG LDLCLHVIHT DYGAAVAADA
ARLAVAPLHR SGGQAQYILR NRPPLRTSTL EPVLAWIEAN AHRALTLADL AAAASMSART
LTRRFAVETR QSPMQWVAGV RIRHAQELLE TTDYTIDRVA NHTGFTTTSN FRAQFQEVVG
TTPGAYRRTF RL
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