Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0085 |
Symbol | |
ID | 5056518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 93366 |
End bp | 94256 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640472352 |
Product | luciferase family protein |
Protein accession | YP_001156948 |
Protein GI | 145592651 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATGC GGATCGGCAT TGTGATCCTT CCGGACCAGC GCTGGGCGGA GTCGGAGCGG CGTTGGCGGC AGGTGGACGA GTGGGGCTTC GACCACGCCT GGACCTATGA CCACCTGGGC TGGCGGGACC TGGTGGACGG GCCGTGGTTC GACTCGATGA CCACCCTGAC CGCCGCCGCG GCCACGACCC GCCGGATTCG GCTCGGCACC CTGGTCGCGT CGCCGAACTT CCGGCACCCG GCTGCTTTTG CCCGCCAGGT CACCGCCCTC GATGACGTGT CCGGCGGTCG GGCCCTGCTC GGTCTGGGTG CGGGCGGCAT CGGCTTCGAC GCCGCGGTGC TCGGCGGCGA GACCCTTCCG CCGCGGCAGC GGGTGGACCG GTTCACCGAA TTCGTCGAGC TGCTCGACCT GGTGTTGCGG GAGGACGGAA CGACGTGGCG GGGTGACTGG TTCACCGCGG TTGACGCTCG GAACAACCCG GGCTGCGTCC AGACGCCGCG GGTGCCGTTC GTCGTCGCCG CGAACGGGCC TCGTTCGATG CGGCTCGCGA TCCGGTACGG CCAGGGCTGG GTCACCACCG GCCCCACCAC CGACGACTTG GAGGTGTGGT GGGAGGGCGT GGCGGACCTG ACTGCCCGGC TGGACAAGTC GCTGGCATCG GTCGGGCGTG AGCCGGGTTC CCTCGACCGG CACCTGTTGT TGGACTCCGC GCCCGTCTTC TCGCTCCGTA GCGCGGACTT CTTCGCCGAG CAGGTGGGGC GGGCCGCGGC ACTCGGTTTC ACCGACGTGA TCACCCACTG GCCCCGAGCC AGTAGCTGGT ACGCGGGGGA GGAGGCGGTC CTGGTGGATG TCGCCTCCCG GCTGCCGGAG CTGCGCCGGC TGACCGACTG A
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Protein sequence | MIMRIGIVIL PDQRWAESER RWRQVDEWGF DHAWTYDHLG WRDLVDGPWF DSMTTLTAAA ATTRRIRLGT LVASPNFRHP AAFARQVTAL DDVSGGRALL GLGAGGIGFD AAVLGGETLP PRQRVDRFTE FVELLDLVLR EDGTTWRGDW FTAVDARNNP GCVQTPRVPF VVAANGPRSM RLAIRYGQGW VTTGPTTDDL EVWWEGVADL TARLDKSLAS VGREPGSLDR HLLLDSAPVF SLRSADFFAE QVGRAAALGF TDVITHWPRA SSWYAGEEAV LVDVASRLPE LRRLTD
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