Gene Strop_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0079 
Symbol 
ID5056512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp87100 
End bp87633 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID640472346 
Producthypothetical protein 
Protein accessionYP_001156942 
Protein GI145592645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.53609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CGTCAACCTC GCCGGGTCCG CGACCAGCGG CGCCCCCGCT CGATCGGCCT 
ATCACATCAG AAACGAAGCG CCCGCTGCCA TCCATCCTCG GTGGCGTTGC TCTTGTGGCC
ATGCTCGCCC TCGGCGGTTG CGCCGCGACC AACGCCAGCA ACGAAAGCGA GGCGACGCCG
TCCACGGCGT CGCCTCCCGC CGCACCGGCG ACGACTGCGG CTTCTGCTCC CAGCGTCGAT
ACGCCGAAGC CAGCCGACTT CGAGCTGACA GTGAAACTGT TGGACAAGCA GTGCTTCGGA
GCGACCGGCT GCAACGTCGA ATTCCGGATC TCGCACGTGT CCTACACAGG GCCGAGTCTG
GATCCTTCGG CCACATACGA GGTCAGCTAC GAGTTCAAGG GGCTAGCCGA CACGCAGCTC
GGCACGTTCG AGTTGTCAGG TGACGGCACA TACTCGATCG AAAAGTTTCA GTTCGGCGAA
ACGAAGGAGT CGGCGGAAGT GACGGCGGTA GTGACAGCTG TGGACAAGAT CTAG
 
Protein sequence
MIKPSTSPGP RPAAPPLDRP ITSETKRPLP SILGGVALVA MLALGGCAAT NASNESEATP 
STASPPAAPA TTAASAPSVD TPKPADFELT VKLLDKQCFG ATGCNVEFRI SHVSYTGPSL
DPSATYEVSY EFKGLADTQL GTFELSGDGT YSIEKFQFGE TKESAEVTAV VTAVDKI