Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0069 |
Symbol | |
ID | 5056502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 78664 |
End bp | 79329 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640472336 |
Product | NUDIX hydrolase |
Protein accession | YP_001156932 |
Protein GI | 145592635 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.509046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCCC GTACCTACAC CGACCCATCT GTTCTGGCCG GCATCGCTGC CGGAGCGTCG TGGGCCGACC CGGAGATGGA CCCGACCCGC ATCGACTGGA CCGCCCGGCG GGCCGCCGCC GCGATTCCGT TCCCGCTGGT CAACGGGCGG CCGGTCAACC CGGCCGCGCC GACCGGAGTG AGGTTCGGCC GCAACGAACT CGGCCACTGG GGCGAGGCCC TGGCCGCCGA CGCAATCGTT ACCGCCTCGG ACCCCGACGG GTGGCGGTGG CTGCTGCTGA TCGAGCGCGG CGACGGACAC GGGTGGGCGC TGCCCGGCGG GCACGTCGAC CCCGGTGAGG ACCCGACGCA CGCGGCGTTC CGGGAGCTGG CCGAGGAAAC AGGTCTGATC GCCGACCCCA TCGACCCGTG GGTCAAGACG CTGCCGGCCC GCTACGTGCC CGACCCGCGC GCCTCGGATG AGGCGTGGAT GGTTACGGTC CCGGTCCGCG TCGACCTCGG CCGCGGCTGG ACCGTCCTGC CCGATGTGAT CGGCCGCGAC GACGCCCGCC GCGCCGAGTG GTTGCCCGCT GTCGACTTCG ACTGCCTCTG CCGCCACCTG GGCTACCACG GCGAGCGGCT GTTCCCGGCT CACCGTGGCC TGCTGGCCGA ACTGTTCGCC GGCTGA
|
Protein sequence | MNARTYTDPS VLAGIAAGAS WADPEMDPTR IDWTARRAAA AIPFPLVNGR PVNPAAPTGV RFGRNELGHW GEALAADAIV TASDPDGWRW LLLIERGDGH GWALPGGHVD PGEDPTHAAF RELAEETGLI ADPIDPWVKT LPARYVPDPR ASDEAWMVTV PVRVDLGRGW TVLPDVIGRD DARRAEWLPA VDFDCLCRHL GYHGERLFPA HRGLLAELFA G
|
| |