Gene Strop_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0069 
Symbol 
ID5056502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp78664 
End bp79329 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID640472336 
ProductNUDIX hydrolase 
Protein accessionYP_001156932 
Protein GI145592635 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.509046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC GTACCTACAC CGACCCATCT GTTCTGGCCG GCATCGCTGC CGGAGCGTCG 
TGGGCCGACC CGGAGATGGA CCCGACCCGC ATCGACTGGA CCGCCCGGCG GGCCGCCGCC
GCGATTCCGT TCCCGCTGGT CAACGGGCGG CCGGTCAACC CGGCCGCGCC GACCGGAGTG
AGGTTCGGCC GCAACGAACT CGGCCACTGG GGCGAGGCCC TGGCCGCCGA CGCAATCGTT
ACCGCCTCGG ACCCCGACGG GTGGCGGTGG CTGCTGCTGA TCGAGCGCGG CGACGGACAC
GGGTGGGCGC TGCCCGGCGG GCACGTCGAC CCCGGTGAGG ACCCGACGCA CGCGGCGTTC
CGGGAGCTGG CCGAGGAAAC AGGTCTGATC GCCGACCCCA TCGACCCGTG GGTCAAGACG
CTGCCGGCCC GCTACGTGCC CGACCCGCGC GCCTCGGATG AGGCGTGGAT GGTTACGGTC
CCGGTCCGCG TCGACCTCGG CCGCGGCTGG ACCGTCCTGC CCGATGTGAT CGGCCGCGAC
GACGCCCGCC GCGCCGAGTG GTTGCCCGCT GTCGACTTCG ACTGCCTCTG CCGCCACCTG
GGCTACCACG GCGAGCGGCT GTTCCCGGCT CACCGTGGCC TGCTGGCCGA ACTGTTCGCC
GGCTGA
 
Protein sequence
MNARTYTDPS VLAGIAAGAS WADPEMDPTR IDWTARRAAA AIPFPLVNGR PVNPAAPTGV 
RFGRNELGHW GEALAADAIV TASDPDGWRW LLLIERGDGH GWALPGGHVD PGEDPTHAAF
RELAEETGLI ADPIDPWVKT LPARYVPDPR ASDEAWMVTV PVRVDLGRGW TVLPDVIGRD
DARRAEWLPA VDFDCLCRHL GYHGERLFPA HRGLLAELFA G