| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0054 |
|---|
| Symbol | |
|---|
| ID | 5056486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 62287 |
|---|
| End bp | 64485 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640472320 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001156917 |
|---|
| Protein GI | 145592620 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0451564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCG TCCAGATCGT CACCACGATC GTCGCGGCCG CCATCACCGC TGTGGCGGTG
TGGCTCGCCG TGCGGGCAGT CATGAAGATG GTGGCCGTGA TCCGGCTGGG CCAGCCGGAC
CCGGCCCGCT TCACCGACTG GGCCACGCGG ACGAAGACGA TGCTGGCGGA GACCGCGGGG
CATACCCGGA TGCTCCGCTG GAGTCTCGTG GGTGCCGCGC ACTGGTTCGT GATGGTCGGG
TTCATCGTGC TGTCACTGCT GGTGCTGGAG GCGTACTTCG AGGTCGTCTC CCCGACCGGC
GGGCTCCCGC TGATCGGGAG CTGGGCGGTC TACGGTCTCG TCACCGAAGC GCTCGGCGTC
TTCGGCATCG CCAGCATCCT GGTGTTGATC GCGATCCGGG TGCGCAACCG CCCAACCCGG
CCCGGTGGAA GGTCCCGGTT CACCGGCTCG ACCATGTGGC AGGGCTACTT CGTCGAGGCC
GTCATTCTCG GCGTCCTGGT GATGGGCTTT CTCATCCGGG GCTTCAAGGT CGCTACCGAT
CACTTCGAGT ACCCGGTCTG GGCGACGCCG CTCAGCCACG CGGTCGGCGG CCTGCTGCCG
GACTGGGAGG CCGGGGTCAG CATCGCCGCC GTCATCAAGA TCGCGATTTC GATGGCCTGG
CTGATCGTGA TTTCGCTGAA CGTGACCATG GGTGTCGCCT GGCACCGCTT CCTGGCCTTC
CCCAACATCT TCTTCAAGCG CAACCCGGGT CGGCCCGGCT CTGGGCTCGG TGCCCTGCGG
CCGATGACCA GTAACGGCGA ACTCCTCGAC TTCGAGGAGG CGGATCCGGA GAAGGACCAG
TTCGGCGTCG CCCAGGTCGA GCAGTTCACC TGGAAGGGGC TGCTGGACTT CAGTACCTGC
ACCGAGTGCG GTCGCTGCCA GTCCCAGTGC CCGGCGTGGA ACACCGGTAA GCCGCTGTCA
CCGAAGCTGT TGGTGCTCAG CCTTCGCGAT CACGCCTACG CAAAGGCCCC GTACCTACTG
GCCGGCGGTG GCAAGGACCT GACCGGTGCA GAGAAGGCCG CCGACGGGCA GCTCGCCCAT
GTTGACGCGC TGGCGCTCGC CGAGGCGGAG AAGCCATTGA TCGGCGGCGT CGAGGAGTCC
GGTGTCATCG ACCCGGACGT GCTCTGGTCC TGCACGACCT GCGGGGCCTG CGTCGAGCAG
TGCCCGGTCG ACATCGAGCA CGTCGATCAC ATTGTCGACA TGCGCCGTTA CCAGATGCTC
ATCGAGTCCA GCTTCCCCTC GGAGGCCGGG GTGATGCTGC GCAACCTGGA GAACAAGGGC
AACCCGTGGG GCGCCCCGCA GAACACCCGG GAGGACTGGA CCAAGGGCCT CGACTTCGAG
GTGCCGCGGG TCGGCGAGGT TGACGACTTC GAGTACCTGT TCTGGGTTGG CTGCGCCGGA
GCCTTCGAGG ACCGGGCGAA GAAGACCACC CGGGCCGTCG CCACGTTGCT CCACGAGGCC
GGCGTCTCCT TCGCCATCCT GGGCGAGGGG GAGACGTGCT CCGGCGATCC GGCCCGCCGG
ATCGGCAACG AGTTCGTCTT CCAGATGCTC GCGCAGCAGA ACGTGGAGAC GCTGAACGAG
GCGTTTGACG GCCGAGAGAA GAGCCAACGC AAGATCGTCG CTACCTGTCC GCACTGCTTC
AACACCCTGG GCAACGAGTA CGGGCAACTC GGTGGTGAGT TCGAGGTTGT GCACCACACC
CAGCTCCTGG CCCACCTGGT GGCCACCGGC GCGCTGACCC CGGTACAGCC GATCGACGGC
GGTGTGACCT ACCACGATCC CTGCTACCTG GGCCGGCACA ACCGGGTCTT CGCTCCGCCG
CGTGAGGTGC TCGGAACGGC GGTCCAGGGC GAGGTCACCG AGATGCCGCG GAACAGTGAA
CGCTCCTTCT GCTGTGGTGC CGGCGGCGCC CGCATGTGGA TGGAGGAGAA GATCGGTAAG
CGGATCAACG TGGATCGGGT CGAGGAGGCC ATGTCAACCG GCGCAGCGAC GGTCGCGGTC
GGCTGCCCGT TCTGCTCGAC GATGCTCAAT GACGGCGTGA ACGGTAAGGG CGCCGGCGAG
CAGGTCGAGG TGGTGGACGT GGCGAGCGTC CTGCTCCGGT CGGTGCGGCC GGAACAGCCG
CAGGCCGACC AGAAGAGCGA CGAGCGGGTC GCGGGCTGA
|
|---|
| Protein sequence | MGSVQIVTTI VAAAITAVAV WLAVRAVMKM VAVIRLGQPD PARFTDWATR TKTMLAETAG
HTRMLRWSLV GAAHWFVMVG FIVLSLLVLE AYFEVVSPTG GLPLIGSWAV YGLVTEALGV
FGIASILVLI AIRVRNRPTR PGGRSRFTGS TMWQGYFVEA VILGVLVMGF LIRGFKVATD
HFEYPVWATP LSHAVGGLLP DWEAGVSIAA VIKIAISMAW LIVISLNVTM GVAWHRFLAF
PNIFFKRNPG RPGSGLGALR PMTSNGELLD FEEADPEKDQ FGVAQVEQFT WKGLLDFSTC
TECGRCQSQC PAWNTGKPLS PKLLVLSLRD HAYAKAPYLL AGGGKDLTGA EKAADGQLAH
VDALALAEAE KPLIGGVEES GVIDPDVLWS CTTCGACVEQ CPVDIEHVDH IVDMRRYQML
IESSFPSEAG VMLRNLENKG NPWGAPQNTR EDWTKGLDFE VPRVGEVDDF EYLFWVGCAG
AFEDRAKKTT RAVATLLHEA GVSFAILGEG ETCSGDPARR IGNEFVFQML AQQNVETLNE
AFDGREKSQR KIVATCPHCF NTLGNEYGQL GGEFEVVHHT QLLAHLVATG ALTPVQPIDG
GVTYHDPCYL GRHNRVFAPP REVLGTAVQG EVTEMPRNSE RSFCCGAGGA RMWMEEKIGK
RINVDRVEEA MSTGAATVAV GCPFCSTMLN DGVNGKGAGE QVEVVDVASV LLRSVRPEQP
QADQKSDERV AG
|
|---|
| |