Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0052 |
Symbol | |
ID | 5056484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 60722 |
End bp | 61651 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640472318 |
Product | hypothetical protein |
Protein accession | YP_001156915 |
Protein GI | 145592618 |
COG category | [S] Function unknown |
COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.274482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATA ATGTTTCGAC AGCTAGCGTA GTCCGGAAGA CCCGTTCAGG CCACGAAAGG GTCTTCTCCA ATACCCCGGA GGGGTCGTCG GAGCGGGCTG GTACGCGACG AGAGGAGGGA AACCCCGTGG AATACACATC CGGCGCGGCC TCCTGGCGGA AGGTACTCCG GCGGGTCGTC GCCGCCCTCA TCCAACGCCC GCGGCAGCGC CGACTCGGCT GGCCGGTCGG CGTACCGTTG ATCGCCGCCG CGGCCGGACT TCTCTTCACC ACCACCGCTA CCACCGCCGG GGGCACCACC CTGCGCGAGG ACCGGCGCCC TCAGCTCAAC CAGCTCATCC AGGACCGCCA CACCGAGGTA GCGGCCAGCG AGCAGCGGGC GGCAGAGCTC CGCGCGACGG TTGAGGCCCG CACCAACGCC CTCGCCGGTT CCGACGGGAC GATCCAGCAG CAGCAGGAGC GGGCGGCGGC CAGCCAGGAG CCGGCCGGAT TCACCGCCCT CACCGGCCTC GGAGTGACCG TGGAGCTCGA CGACGCGCCG AGACGCAACG ACGGCAGCCT GCCCACCGGC GTTACCAACC ACGACCTGGT GGTGCACCAA GGTGACGTAC AGGCCGTGGT GAACGCCCTC TGGGCCGGCG GCGCGGAGGC GATGTCAATC ATGGATGTCC GCGTGCTCGC CACAAGCGCG GTACGCTGCG TTGGTAACAC CCTGCTGCTC CATGGCCGGG TGTATTCCCC TCCATTCAAG ATCGTAGCGA TCGGCGACCC CGCCGCCCTC CAGCGGGCAC TCGCCGAGTC CGAGGGAGTC CGGTTGTTCA GGGACCTGGC GAACACCTAC AAGCTGGGCT ATAAGGAGAC GGTCTCCACC GTGTCAGTAC CGGCGTTCGA TGGCTCCGCC GCACTCCGTT GGGCGACGGT GCCCGAATGA
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Protein sequence | MANNVSTASV VRKTRSGHER VFSNTPEGSS ERAGTRREEG NPVEYTSGAA SWRKVLRRVV AALIQRPRQR RLGWPVGVPL IAAAAGLLFT TTATTAGGTT LREDRRPQLN QLIQDRHTEV AASEQRAAEL RATVEARTNA LAGSDGTIQQ QQERAAASQE PAGFTALTGL GVTVELDDAP RRNDGSLPTG VTNHDLVVHQ GDVQAVVNAL WAGGAEAMSI MDVRVLATSA VRCVGNTLLL HGRVYSPPFK IVAIGDPAAL QRALAESEGV RLFRDLANTY KLGYKETVST VSVPAFDGSA ALRWATVPE
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