Gene Strop_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0047 
Symbol 
ID5056479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp54898 
End bp56286 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content71% 
IMG OID640472313 
Productprotein kinase 
Protein accessionYP_001156910 
Protein GI145592613 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.576125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTT CCGGGGTGAA GCTCGGCAAC CGTTACCGGC TCGACGAGCG GATCGCCAGC 
GGCGGCATGG GCGACGTCTG GCGCGGCACC GACGAGGTGC TCGGCCGGAC GGTCGCCGTG
AAGAGTCTCC TGCCGGCCCT GCTCGACGAT CCTGACTTCG CCGAGCGGTT CCGGGGCGAG
GCGCGCACGA TGGCGACCAT CAACCACCCC GGTGTCGTTG ACATCTACGA CTTCGGCAGT
GATCAGCAGA TCGCCTTCCT CGTGATGGAG TACGTGGAGG GCGATGCGCT CTCGGCCACC
CTGAACCGGG TCGGCCGGCT CACCTCCGCC CGAACGATGG CCCTGGTCGC CCAGGCCGCC
GACGCGTTGC ACGCCGCCCA CCTGGAGGGC ATCGTGCACC GAGACGTGAA GCCCGGGAAC
CTCCTCGTCC GGCCGAACGG CACCCTGGTT CTCACCGACT TCGGTATCGC CCGATCCGAC
CTGGTGGCCC AGCTCACCGC CGCCGGCTCG GTGCTCGGCA CCGCCTCGTA CATCTCACCG
GAGCAGGCGA CCGGTGCGGT CGCCACCCCT TCCTCGGACG TGTACGCCCT CGGCGTGGTC
GCCTACCAGT GCCTCTCCGG CCGACGGCCG TTCGAGGGCG ACAACCCACT CGATATCGCC
CTGCGGCATG TCCGGGATAC GCCTCGGGCG TTGCCTGCCG ACATTCCATC GCAGGTGCGG
GCGGTGGTCG AGCGGGCTAT GGCGAAGGAC CCGGCGGACC GCTGGCCGAG CGCGGCGGCG
TTGGCCGGGG TGACCCGACA ACTGAAGGCC CAGCTCTCCC AGGCCGCCCG GTCGGTTGGA
CAGGCCAGTC CGGTTTCGGC GGTGCCGGGT CGGGTCAGTC CGGTCTCGGC GGCGCCGGCC
TCGCCGGCGC CCGGCCGGGC CAGCGTGGTC TCGGCGGTGC CCGTCGCGCC GGGTCGGGCC
AGGGTGCCTT CACCGGCCAC TGCCCTTCCA CCACAGGTTT CCCGCTCGCC GGTGGCGCCG
CAGCCCTTCC ATCCGCCGGC CCCGCGACCG CAGGCCGGGT GGTCCCCGGT CGCCGCCGTG
CCGCCGGCGT CAGCGCGACC CGGGCGCCCC CCGATGTCGG CTCCGCCGCC CCGCCCGTCC
CGGTTCGGAA GAGGACTCCT CATCCTCCTC TTGGCCGTTC TGGTCGTGAC CTGCTTTGGC
ATGGTTTCCT CCGTTTGGCA CGAGGCGTAT ACCGGGTCCT CCGGCCGGCC GGTGCAGTCG
ACGGGAATGT CCGGCGAACT CCGGCATGAC GGGCGCGACG ATTCAGACCG AACGTCGTAC
CGTCAATTGC AACTGCCCTC GACGGGCGAC GACGAGACGA CGACGAGCGA AGGACGACAG
ACGCGATGA
 
Protein sequence
MLSSGVKLGN RYRLDERIAS GGMGDVWRGT DEVLGRTVAV KSLLPALLDD PDFAERFRGE 
ARTMATINHP GVVDIYDFGS DQQIAFLVME YVEGDALSAT LNRVGRLTSA RTMALVAQAA
DALHAAHLEG IVHRDVKPGN LLVRPNGTLV LTDFGIARSD LVAQLTAAGS VLGTASYISP
EQATGAVATP SSDVYALGVV AYQCLSGRRP FEGDNPLDIA LRHVRDTPRA LPADIPSQVR
AVVERAMAKD PADRWPSAAA LAGVTRQLKA QLSQAARSVG QASPVSAVPG RVSPVSAAPA
SPAPGRASVV SAVPVAPGRA RVPSPATALP PQVSRSPVAP QPFHPPAPRP QAGWSPVAAV
PPASARPGRP PMSAPPPRPS RFGRGLLILL LAVLVVTCFG MVSSVWHEAY TGSSGRPVQS
TGMSGELRHD GRDDSDRTSY RQLQLPSTGD DETTTSEGRQ TR