Gene Strop_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0046 
Symbol 
ID5056478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp53391 
End bp54896 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content69% 
IMG OID640472312 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_001156909 
Protein GI145592612 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.56645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAC CACTGCGTCG GGTGGGTCTC GTCGTGATGG TCCTGTTCGG GCTTCTTTTC 
GCGAACCTGA ACTGGATTCA GGCCTACAAG GCCGACGACT ACCGCAACAG TGACTACAAC
GGCCGGGTCC AGGTCGCCGA ATATGAGCGC AAGCGCGGCA ACATCGAGGC CGGTGGTACG
GCGCTCGCGG TCAGCAAGGC GACCGACGGG GAGCTGGAGT ACCTGCGCAC CTACCCGGGC
GGGGAGAAGT ACGCCCACGC GATCGGCTAC AAGCCGGTCA ACCTGGCCGA CACCGGCATC
GAGGAGGCGG AGAACGCCTT CCTGGCCGGC ACCAGCGATC AGCTGATCGG TGACCGGCTG
CGGGACCTGG TCACCGGCGA CGAGACCGCT GGCGCGAATG TCCTGCTCAC CGTCTCCCAG
CAGGCGCAGG ACGTCGCGTA CGAGCAGCTG GGGGAGAATC GCAAGGGGGT CACCAAGGGT
GCGGCCATCG CGATCGACCC GCGTACCGGG GCGGTGCAGG CGCTGGTCTC CATGCCGAGC
TTCAACCCGA ACCCGTTGGC CAGCCACGAC ACCGACGAGG CCACGGCGGC CTACAACGAG
TTACAGCAGA ACCCGGATGG GCCGCTGAAG AACCGGGCGC TCGGCGAGGT GCTCCCGCCG
GGCTCCACCT TCAAGATCGT GACGGCTGCC GCCGCGCTGG AGAACGGTGT CACGACGGAG
ACGAAGATCC CTGCTGGGCC CAGCTGGACC CCGCCGACCT CCGGCGAGCC GATCGGGAAC
GCGGCCCCCT CCATCTGCCC GGAGGCAGAG GTCACCCTGA TGAACGCGGT GACCGAGTCA
TGTAACACCG GCTTCGCCCA GCTCGGTGTG CGCCTCGGCG CGGACACCCT CAAGGAGAAG
GCACGGCAGT TCGGTTTCGA GCAGGACGAC CTGACCGTCG GCCGGCTCGG TGAGGACGGC
GAACCGGTCG CGGCCAGTCG GACCGGCAGC ATGGAGAACG CCGACGGCAG CGTTGACCCG
GCTGCCCTCG CCCAGTCCTC CATCGGCCAG CGAAATGTGC GGATGACCCC GCTCCAGGGC
GCCCTGATCG CCGCCACCGT CGCCAACGAT GGCAGCCAGA TGCGGCCGTA CCTGGTCAGT
CAGATCCTCG GCGCTGATCG CACCACCAAC TACTACACCG CCGAGCCCAG CGAGTTGCGC
CAGCCGGTCA GTGACCAGGT CGCCGCCGAC CTGCGGGAGA TGATGGAGAG TGTCGTCCAG
AACGGCACCG GCCGCAACGC CCGGATCAGC GGCTACACCG TCGGCGGCAA GACCGGCACG
GCACAGGCTG GCCCGAACAC GCCCCCCCAC GGCTGGTTCA TCGGCTTCGC GCTCGACAAG
GACGGCAACC CGGTCTCCGC GGTCTGTGTC CTGCTGGAGG AGGCCGGCGA CGGGGGCAGC
GCCGAGGCCG CCCGGATCGG CGGGCAGATC ATGCGGGCGG CGATCGCCTC TCCGGGGAGC
CGCTGA
 
Protein sequence
MNAPLRRVGL VVMVLFGLLF ANLNWIQAYK ADDYRNSDYN GRVQVAEYER KRGNIEAGGT 
ALAVSKATDG ELEYLRTYPG GEKYAHAIGY KPVNLADTGI EEAENAFLAG TSDQLIGDRL
RDLVTGDETA GANVLLTVSQ QAQDVAYEQL GENRKGVTKG AAIAIDPRTG AVQALVSMPS
FNPNPLASHD TDEATAAYNE LQQNPDGPLK NRALGEVLPP GSTFKIVTAA AALENGVTTE
TKIPAGPSWT PPTSGEPIGN AAPSICPEAE VTLMNAVTES CNTGFAQLGV RLGADTLKEK
ARQFGFEQDD LTVGRLGEDG EPVAASRTGS MENADGSVDP AALAQSSIGQ RNVRMTPLQG
ALIAATVAND GSQMRPYLVS QILGADRTTN YYTAEPSELR QPVSDQVAAD LREMMESVVQ
NGTGRNARIS GYTVGGKTGT AQAGPNTPPH GWFIGFALDK DGNPVSAVCV LLEEAGDGGS
AEAARIGGQI MRAAIASPGS R