| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0041 |
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| Symbol | |
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| ID | 5056472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 47663 |
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| End bp | 48736 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640472306 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001156904 |
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| Protein GI | 145592607 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0865438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGTCG CATTCGTGAC CGGATCGGGC GGTCTGATTG GCTCCGAAGC GGTTCGACAT
TTTGCCGGCC TCGGACTCGA GGTCGTCGGT ATCGACAACG ACATGCGGCA GGAGTTCTTC
GGCGAGGAGG CCTCGACCGC CTGGAACGTC CGGGGGCTGA CCGAGGAACT GGGCGCCGCC
TACTCGCACC ACAGCATTGA CATCCGCGAC CGGGACGCGC TCGCGAAGCT CTTCCGCCGA
TACGGCCGCA ACACCGCTGT GGTGATCCAC ACCGCCGCAC AGCCGTCGCA CGACTGGGCC
GTCCGCGACC CGTTCACCGA CTTCGACGTC AACGCGGCCG GCACCCTCAA CGTGCTACAG
AACGTCCGCG AGCACTGCAT CGAGGCGCCG GTCATCCACT GCTCCACCAA CAAGGTCTAC
GGAAACCGGC CGAACAGCCT GCCCCTGGTC GAGTTGGAGA CCCGGTGGGA GATCGAGCCC
GGGCACCCGT ACGAGCAGGG CATCCGGGAA GACATGTCGA TCGACGCCTG CCTGCACTCG
ATCTTCGGCG CCTCCAAGGT GGCGGCGGAC GTGATGGTGC AGGAGTACGG CCGTTACTTC
GACATGCGGA CGGCCTGCTT CCGGGGTGGA ACCCTGACCG GGCCCGCGCA CGCCGCCACC
GAGTTGCACG GCTTCCTCGG GTACGTGATG CGGGCCAACA TGGAACGCCG GAAATACAAG
ATCTTCGGAT ATCAGGGCAA GCAGGTCCGG GACGCGATCC ACAGCTCGGA CGTGGTCTCG
GCGTTCGAGT CGTTCTTCCG TAACCCGCGC TCCGCCGCCG TCTACAACCT GGGCGGTGGC
CGGCACTCCA ACACCTCGAT GCGCGAGGCC TTCGCCCTGG CCCAGCAGAT CACCGGACAG
GAGATGAACT CCGAGTACGT CGAGGCGAAC CGAATCGGCG ACCACAAGTG GTGGATCGGC
TCGAACGAAG CCTTCCACGC GGACTACCCG GACTGGAAGC AGGTCTACGA CGTGCCCATG
ATCATGCGTG AGATCTACGA GGCCAACGTC GACAAGTGGA TTCCGCAGCC ATGA
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| Protein sequence | MSVAFVTGSG GLIGSEAVRH FAGLGLEVVG IDNDMRQEFF GEEASTAWNV RGLTEELGAA
YSHHSIDIRD RDALAKLFRR YGRNTAVVIH TAAQPSHDWA VRDPFTDFDV NAAGTLNVLQ
NVREHCIEAP VIHCSTNKVY GNRPNSLPLV ELETRWEIEP GHPYEQGIRE DMSIDACLHS
IFGASKVAAD VMVQEYGRYF DMRTACFRGG TLTGPAHAAT ELHGFLGYVM RANMERRKYK
IFGYQGKQVR DAIHSSDVVS AFESFFRNPR SAAVYNLGGG RHSNTSMREA FALAQQITGQ
EMNSEYVEAN RIGDHKWWIG SNEAFHADYP DWKQVYDVPM IMREIYEANV DKWIPQP
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