Gene Strop_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0021 
Symbol 
ID5056452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp26241 
End bp26669 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content70% 
IMG OID640472286 
ProductFe-S metabolism associated SufE 
Protein accessionYP_001156884 
Protein GI145592587 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA TGCCTCCCCG GCTGGCCGAG ATCGTGGACG AGTTCACCAC GGCGCCCCGT 
GACATCGTGC TGGAGCTGCT ACTGGAGTAC GCCGACGCCA TCGGGCCGTT GTCGTCCGGA
CACCCCGACC GCGCAGAGAT GGAGCAGGTC CCGGAGTGCC AGACGGCACT CTTCCTACGA
GCACGCGTCA CTCCGGAGGG CAGCGTCGAA GCCGTCTTCG ACTGCCCACC CGAAGCCGCC
ACAACCCGCG CCTTCGCGGG CATTCTCGCC GAAGGGCTCG CCGGAGCTCG GCCAGCGCAG
GTCCTGGCGG TCCCCGACGA CCTGTACCAG CGGATGGGGC TGGCCCAGGC GGTCAGTCCG
CTACGGATCC GGGGCGGCAC CGCAGTCCTG GCCCGGCTCA AGCGTCAGGT CCGGGAACAG
ACAGGCTGA
 
Protein sequence
MPEMPPRLAE IVDEFTTAPR DIVLELLLEY ADAIGPLSSG HPDRAEMEQV PECQTALFLR 
ARVTPEGSVE AVFDCPPEAA TTRAFAGILA EGLAGARPAQ VLAVPDDLYQ RMGLAQAVSP
LRIRGGTAVL ARLKRQVREQ TG