| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0010 |
|---|
| Symbol | |
|---|
| ID | 5056439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 12603 |
|---|
| End bp | 13529 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640472273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001156873 |
|---|
| Protein GI | 145592576 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.455486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.649811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGA CACAGGCGAA GTCGGGGAAC GCGGGTAACT CGGCTAACCC AGTCGACGAG
GACGGCGCCA CGAGCGGTGC CCCAGCCGCC GGGCGGGCGG CAGTGGGCCG GGCCACCGTC
CCCGCCGACG TGCCGGCCCC GAAGTTCACG AGGGCTCCGG GGATGGCCCC GCCGCCGGAC
AAGCCGGCCG AGGAGCCGGA ACCCGGCGAG GAACCGGCTG AGGCCACGAA GGCCGAGACA
CCGCGGACCA GTGGTGCCGC CGCTGAGACG ACCTCCGCGG CCACCCAGCC GTCGACCTCC
GGTGGTGCTG GGCAGACCAG CACGGCCGCC GGGAGCACTG CTGCCGCCCT GGGTGGTGCG
AACGGCCTCC CCCGATTCGG TGACACCGGG AGCCAGCCGC GGGTCACCGG GACCGCTCGC
CCCCAGCCGA ACTCCGCTGG CCGGCCTCAG GGCGGTAGTC TCCCGCCGGG AATCAGTGGG
GTGGCGGCCG TCGGGGCGGC GCGGGTCGGT GAGGCGGTAC GCGCGGCGCG TACCGCGGTC
AGCTCTGCCG CGTCTCGCGG GCCGCGCCGG GCCCGGCTGA ACCTGCGGCG GATCGACCCA
TGGTCGGTGA TGAAGTTCGC CTTCGCCGTT TCGGTGGTGC TCTTCATCGT CGTCGTGGTC
GCGACCTCGG TGCTGTATCT GGCGCTGGAC GCGATGGGCG TGTTCGCCAG CGTCAACGAC
AGCCTGAGTG ATCTGGTCAA CGCGGGCGGC GGCCAGAACA CCAACGGCTT CCAGATCACC
GCCCGCGGCG TGATCCTGAG TTCCGCGTTG ATCGGCCTGG TCAACGTCGT GCTGTTCACG
GCGCTGGCAA CGCTGGGCGC ATTCGTCTAC AACGTCTGCG CCGACCTGGT GGGCGGTGTC
GAGCTGACGC TCGCCGAGCG CGACTGA
|
|---|
| Protein sequence | MTETQAKSGN AGNSANPVDE DGATSGAPAA GRAAVGRATV PADVPAPKFT RAPGMAPPPD
KPAEEPEPGE EPAEATKAET PRTSGAAAET TSAATQPSTS GGAGQTSTAA GSTAAALGGA
NGLPRFGDTG SQPRVTGTAR PQPNSAGRPQ GGSLPPGISG VAAVGAARVG EAVRAARTAV
SSAASRGPRR ARLNLRRIDP WSVMKFAFAV SVVLFIVVVV ATSVLYLALD AMGVFASVND
SLSDLVNAGG GQNTNGFQIT ARGVILSSAL IGLVNVVLFT ALATLGAFVY NVCADLVGGV
ELTLAERD
|
|---|
| |