| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0003 |
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| Symbol | |
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| ID | 5056432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3151 |
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| End bp | 4284 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640472266 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001156866 |
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| Protein GI | 145592569 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000316606 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00386911 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTCC GAGTAGAGCG CGACGCGCTC GCCGAGGCCG TGGCCTGGAC CGCGAAAAGC
CTGCCGAACC GGCCGTCGGT GCCGGTGCTC GCCGGTGTGC TGCTGCGGGT CACCGACGGC
AACCTGCAGG TCTCCGGCTT CGACTACGAG GTCTCCAGCC AGGTGACCGT CGAGGTGCAG
GGGGACGCCG ACGGCGCCAC CCTGGTCTCC GGCCGGCTCC TCGCCGAGAT CACCAAGGCG
CTGCCGGCGA AACCGGTCGA CATCGCGGCG GTCGGCGCTC ATCTCGAACT CGTCTGCGGC
AGCGCCCGCT TCACTCTGCC CACCATGCCG GTCGAGGACT ACCCCACCCT CCCGGAGATG
CCGGTCAGCG CTGGCACCAT CGACGCCGCC GCGTTCGCCG CCGCCGTTGC CCAGGTAGCC
GTGGCAGCCG GCCGGGACGA GACCCTGCCG ATGATGACCG GCGTCCGGCT GGAGCTCTCC
GGCGGCACGT TGGCCATGCT CGCCACCGAT CGCTACCGCC TCGCCCTGCG CGAGATCGAG
TGGAACCCGG AAGACCCGGA GATCAGCCTC AACGCGCTGG TACCGGCCCG CACGCTGCAT
GACACCGCCA AGGCCCTGGG GCCGCTCGGC GGTCAGGTAA CCATGGCGCT CTCCCAGGGA
GCGGCGGGTG AGGGCATGAT CGGTTTTGTC GGCGGCCCCC GCCGCACCAC CAGCCGACTG
CTTGACGGCG CCAACTACCC GCCGGTGCGC TCCCTCTTCC CCGCCACCCA GAACGCGCAG
GCCCAGGTCC CGGTCAGCGC GCTCATCGAG GTCGTCAAGC GGGTCGCGCT CGTCGCCGAA
CGCACCACTC CGGTGCTGCT GAGCTTCAGC GACGACGGAC TGGTGGTCGA GGCCGGTGGC
ACCGAGGAGG CGCGCGCCAG CGAGGCGATG GAGGCCACCT TCAGCGGTGA TCCGCTGACC
ATCGGCTTCA ACCCCCAGTA CCTGATCGAC GGTCTCTCGA ACATGGGGAC CCAGTTCGCC
GTTCTGTCGT TCGTCGACGC CTTCAAGCCG GCGGTGATTT CTCCCGTCGG CGAGGATGGC
GAGGTCGTGC CCGGGTATCG CTACCTCATC ATGCCGATCC GCGTTTCCCG CTGA
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| Protein sequence | MKFRVERDAL AEAVAWTAKS LPNRPSVPVL AGVLLRVTDG NLQVSGFDYE VSSQVTVEVQ
GDADGATLVS GRLLAEITKA LPAKPVDIAA VGAHLELVCG SARFTLPTMP VEDYPTLPEM
PVSAGTIDAA AFAAAVAQVA VAAGRDETLP MMTGVRLELS GGTLAMLATD RYRLALREIE
WNPEDPEISL NALVPARTLH DTAKALGPLG GQVTMALSQG AAGEGMIGFV GGPRRTTSRL
LDGANYPPVR SLFPATQNAQ AQVPVSALIE VVKRVALVAE RTTPVLLSFS DDGLVVEAGG
TEEARASEAM EATFSGDPLT IGFNPQYLID GLSNMGTQFA VLSFVDAFKP AVISPVGEDG
EVVPGYRYLI MPIRVSR
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