| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0001 |
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| Symbol | |
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| ID | 5061084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 625 |
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| End bp | 2388 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472264 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_001156864 |
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| Protein GI | 145592567 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000718914 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000588843 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGGATA CAACCGACCT CGCCGCGGTG TGGACGGCAA CGACCGACGA GTTGGCCGAC
GAGATCGTCT CTGCCCAGCA GCGGGCCTAT CTGCGACTGA CCCGCCTCCG CGCCATCGTC
GAGGACACCG CGCTCGTCTC CGTCCCGGAC GCCTTCACCC GAGATGTCAT CGAGTCCCGG
CTCCGCCCGG CGATCACCGA GGCCCTCACC CGCCGGCTGG GGCGCCCCAT CCAGGTGGCG
GTCACGGTGC GAGCACCGGA AGACGCCCCC GGCCGCCCGG CCGGCACCAT CTACCACAGC
GCCCCGAGCC CGGAGACCGG CGCGTTGCCC GGCGACACCA CCGACCGCGC CGCGGGAGGG
GGCCCGGACG ACGGCGTGGA CCACAGGTTC CCGCTGATCC CCGGGCAGGC CCAACCGGAG
CGCCGCACTG CGGCGCCCGC TGGTTCGTAC GGCGAGCAGA CGACGCCGAT GTCCCGGGAC
AGCCAGGAGC CGTTGTTCAG CTCCGCCTTC GCCGGGCCGC CCCGAGGCGA GCGTCACGAT
GTTGACGAGC AGGCCCGGCT GGGCCCACCG GTGACCGAAC GCCCGTTCGA GGCCCACTAC
CGAGCAGAGG GGGCGGACCA GCACGGGGGG CGGGCCCTGC CCCGGGAACT CGGCACCGAC
AGCGGGCCGG GGAGGGTGGA CCACCGACCG GGTGGCCGCG AGGACCGTCG GCCACCGGCA
CCCGCCGACG GCGGCGGCAA CCGGCTCAAC CCGAAGTACA TGTTCGAGAC GTTCGTTATC
GGTTCGTCGA ACCGATTCGC CCACGCGGCT TCGGTGGCGG TCGCCGAGTC ACCGGCGAAG
GCGTACAACC CGCTGTTCAT CTACGGCAGC TCAGGGCTGG GCAAGACGCA CTTGCTGCAC
GCGATCGGCC ACTACGCCAC GACGCTCGGC AACGCCAACT CGGTCCGGTA CGTCTCGACC
GAGGAGTTCA CCAACGACTT CATCAACTCG CTGCGCGACG ACAAGACCAG CGCCTTCCAG
CGCCGGTACC GGGACGTCGA CATCCTCCTG ATCGACGACA TCCAGTTCCT GGAGAACCGG
GAGCGGACGC AGGAGGAGTT CTTCCACACC TTCAACACAC TGCACAACGC CAACAAGCAG
ATCGTGATCA CCTCCGACCG GTCGCCGAAG CAGCTGGCGA CTCTGGAGGA CCGGCTGCGG
ACCCGGTTCG AATGGGGCCT ACTCGCCGAC ATCCAGCCGC CAGACCTGGA GACCCGGATC
GCGATCCTCC AGAAGAAAGC CGCCCAGGAA CGGCTGTTCG CCCCGCCGGA CGTACTGGAG
TTCATTGCGT CCCGAGTGTC GAACTCCATC CGAGAACTTG AGGGTGCGCT GATCCGGGTC
ACCGCGTTCG CCAGCCTCAC CCGGTCATCG GTGGAGTTGT CGCTGGCCGA GGAGGTGCTG
CGGGACTTCA TTCCGGACGG CACCGGGCCA GAGATCACCG CCGACCAGAT CATGGTTGCC
ACCGCCGACT ACTTCGGGGT GAGTCTGGAG GACCTGCGCG GGCACTCCCG CTCGCGGGTG
CTCGTCAACG CCCGCCAGGT CGCCATGTAC CTGTGCCGGG AGCTCACCGA CCTGTCGCTG
CCCCGAATCG GACAGGCGTT CGGGGGCCGC GACCACACCA CGGTCATGCA CGCCGACCGC
AAGATCCGTC AGCAGATGGC CGAGCGCCGG TCGCTCTACA ACCAGATCGC CGAGCTGACC
AACCGGATCA AGCAGAACAC CTGA
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| Protein sequence | MTDTTDLAAV WTATTDELAD EIVSAQQRAY LRLTRLRAIV EDTALVSVPD AFTRDVIESR
LRPAITEALT RRLGRPIQVA VTVRAPEDAP GRPAGTIYHS APSPETGALP GDTTDRAAGG
GPDDGVDHRF PLIPGQAQPE RRTAAPAGSY GEQTTPMSRD SQEPLFSSAF AGPPRGERHD
VDEQARLGPP VTERPFEAHY RAEGADQHGG RALPRELGTD SGPGRVDHRP GGREDRRPPA
PADGGGNRLN PKYMFETFVI GSSNRFAHAA SVAVAESPAK AYNPLFIYGS SGLGKTHLLH
AIGHYATTLG NANSVRYVST EEFTNDFINS LRDDKTSAFQ RRYRDVDILL IDDIQFLENR
ERTQEEFFHT FNTLHNANKQ IVITSDRSPK QLATLEDRLR TRFEWGLLAD IQPPDLETRI
AILQKKAAQE RLFAPPDVLE FIASRVSNSI RELEGALIRV TAFASLTRSS VELSLAEEVL
RDFIPDGTGP EITADQIMVA TADYFGVSLE DLRGHSRSRV LVNARQVAMY LCRELTDLSL
PRIGQAFGGR DHTTVMHADR KIRQQMAERR SLYNQIAELT NRIKQNT
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