Gene Pnuc_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2088 
SymbolrpmH 
ID5053397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2159166 
End bp2159300 
Gene Length135 bp 
Protein Length44 aa 
Translation table11 
GC content48% 
IMG OID640472263 
Product50S ribosomal protein L34 
Protein accessionYP_001156863 
Protein GI145590266 
COG category 
COG ID 
TIGRFAM ID[TIGR01030] ribosomal protein L34, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.149936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA CTTACCAACC CTCAGTAACA CGTCGTAAAC GTACCCACGG CTTTCGTATT 
CGGATGAAAA CCAAAAGCGG ACGCGCAGTT TTGAATGCAC GCCGTGCAAA AGGCCGCAAG 
CGTTTGGCTG TTTAA
 
Protein sequence
MKRTYQPSVT RRKRTHGFRI RMKTKSGRAV LNARRAKGRK RLAV