Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_2077 |
Symbol | |
ID | 5053257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 2145943 |
End bp | 2147259 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640472252 |
Product | sun protein |
Protein accession | YP_001156852 |
Protein GI | 145590255 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCGACA ATAAAAAAAC ACTCAGCCTT CCGCTCTCTG AAGCGATTAC TATTGCGGCG CAAGCAATTA GCGAGGTAAT GAGCGGCCGT TCGCTTACTG AAGTATTGGA TGAGTTAGAC GCTCATGAGC GACCAATTGT GCAAAGCTTA ACTTTCGATG CTTTACGAAA GTGGGTACGC TCTCATGAAC TTATTAAGCA ATTTGTTCCC AAGACACCGC CGCCAGAAGT AGATCATTTA CTGAGCGTTG CTATTGCATT GTTCATAAGA AATGATGCGG ATGACAAAGG CTATGCAGTA CATACAGTGG TTGATCAAGC GGTTAGAGCT TGTGGTGAGT ATGACCAGAC GTTGTATGCC AAGGGCCTGG TAAATGCTGT ATTACGCAAG GTGAGCCTAG CTTTGCAGCC AGTAGCAGAC AAGCCTTTTT ACCCGCCTGA CCCCATTGCC ATGTTTGTGC CGCCCTGGTG GCGCGCTAGT TTGAAACGGA ATTATTCAAA AGATTGGCAA GCCATTCTAT TTGCCCAAGC AAAGCGGGCG CCCTTAATTT TGCGCGTGAA CCAAAAACAA TATTCACGAG ATGAATATCG GGCTTTATTA ACTGAGTCAG GAATTCAATC AAAGCCAATA AATGCCATAG CAGGAATTTC ATTGCCCTCT GCACTGTTAT TGCCTGATGC AGTGCCTGTA TCAGATCTGC CTGGTTTTTA TAGTGGTGCA GTATCCGTTC AGGACGCAGG AGCACAATTA GCGGCAACCT TATTAAATCC ACAGGCAGAT GAGTTGATAT TAGATGCATG CGCTGCACCG GGCGGTAAAA CTGCACATTT ATTAGAGTTA GCCGATTGTC AAATGCGAGC CCTTGAGCTA GATGGCAAGC GCCTTGGAAA AATTGGGGGG AATTTAGATC GTCTGCGTTT ACATTCTGAA AAAGCAAAGG TATTACGCGG CGACGCCTCT AAGTCTGCGT GGTGGGATGG CGTACCCTTT GACAAAATTT TGATAGATGC CCCTTGTTCT GCCTCGGGAA TTGTTGCTCG ACACCCAGAC ATTCCTTTTT TAAGGCGCGA ATCGGATATT CCAGTGCTAC AACAAAGACA GCGCGAGATT TTGACCCAGG CCTGGAAAAT GCTGAAGTCT GGAGGCATTC TTTTATATGT AACCTGCTCT GTGTTTCCTG AGGAGGGTGA GGATCAGGCG GTTTGGTTTG CTCAGGAACA TAGCAATGCG TTACGATTGG ACGCTCCAGG ACAGCTTTTG CCAACCGATG CAAATGATGG CTTTTATTAT GCTTTGTTTA AGAAAAATGG GCCATGA
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Protein sequence | MTDNKKTLSL PLSEAITIAA QAISEVMSGR SLTEVLDELD AHERPIVQSL TFDALRKWVR SHELIKQFVP KTPPPEVDHL LSVAIALFIR NDADDKGYAV HTVVDQAVRA CGEYDQTLYA KGLVNAVLRK VSLALQPVAD KPFYPPDPIA MFVPPWWRAS LKRNYSKDWQ AILFAQAKRA PLILRVNQKQ YSRDEYRALL TESGIQSKPI NAIAGISLPS ALLLPDAVPV SDLPGFYSGA VSVQDAGAQL AATLLNPQAD ELILDACAAP GGKTAHLLEL ADCQMRALEL DGKRLGKIGG NLDRLRLHSE KAKVLRGDAS KSAWWDGVPF DKILIDAPCS ASGIVARHPD IPFLRRESDI PVLQQRQREI LTQAWKMLKS GGILLYVTCS VFPEEGEDQA VWFAQEHSNA LRLDAPGQLL PTDANDGFYY ALFKKNGP
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