Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_2073 |
Symbol | |
ID | 5052583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 2140109 |
End bp | 2142313 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640472248 |
Product | hypothetical protein |
Protein accession | YP_001156848 |
Protein GI | 145590251 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTA AAGTCAACTT TCTCGATAAG CTACGCCTTG AAGCGAAGTT TGATGATTTC ACAGTAATTG CTGATCAACC CATTCGATAC AAAGGAGATG GTTCGGCGCC AGGCCCCTTT GATTATTTTT TGGCTTCATC GGCCTTGTGC GCAGCGTATT TTGTAAAGCT CTATTGCGAG ACTCGCAACA TTTCAACTGA CAATATTCGC CTATCGCAGA ATAATATTGT TGATCCAGAC AATCGCTATC AGCAAATTTT TAAGATTCAG GTTGAATTGC CAGCTGATAT CTCTGCCAAT GATCGTCAGG GAATTTTGCG CTCCATCGAG CGCTGTACAG TTAAAAAAGT AGTGCAAGCT GGGCCAGAGT TTGTCATCGA AGTAGTGGAG AACCTGGACT CCGACGCACA GAGCCTATTA GCCTTGAAGC CCGCTGCTGA TGCCAGTACT TTTATAGCAG GCAAAGATCT ACCCTTGGAA CAAACGATTG CCAATATGTC GGGCGTTTTG GGCAATCTTG GGATTAAGAT CGAGATTGCT TCGTGGCGAA ATATTATCCC CAATGTATGG TCACTACACA TTCGTGATGC GCATTCACCA ATGTGTTTTA CGAATGGCAA AGGCTCAACG AAAGAAAGCG CTTTAGCATC GGCCTTAGGT GAATATATAG AGCGCCTCAG TAACAACCAT TTTTATGCGG GCACTTTTTG GGGTGAAGAC ATTGGCAATG CAGAATTTGT GCATTACCCA AGTGAGCGCT GGTTTCAGCC TGGCCCGAAT GACACACTAC CAACAGAAAT CCTAGACGAC TACTGTCGAA CAATTTATGA CCCCGACGGA GAGCTGCGCG CAATACATCT GATTGATACC AATTCTGGCA ATGTAGACCG TGGCATCTGC TCATTGCCAT ACATTCGTCA GTCTGATGGG AGGGTAGTTT ATTTTCCTTC CAACTTAATT GAGAACCTCT TTGTCAGTAA TGGCATGAGT GCTGGTAATA CACTGGCTGA GGCGCAAGTG CAATGCTTGT CAGAGATTTT CGAACGCGCC GTCAAGCGTG AAATTCTGGA AGGCGAAATT GCTTTGCCAG ATGTGCCGCA GGAGGTAATA GCTAAGTACC CAAGGATTCT TGCCGGCATT CAGGGCCTAG AGGAACAGGG CTTCCCAGTA TTGGTAAAAG ATGCATCGCT GGGCGGCATT TATCCGGTAA TGTGCGTCAC TTTAATGAAT CCTCGAACAG GTGGCGTGTT TGCCTCATTC GGCGCTCATC CAAGCTTAGA GGTTGCACTA GAGCGGAGCT TGACTGAGCT ACTACAAGGG CGAAGTTTAG AGGGCTTAAA CGACTTACCA CCACCTACTT TTGCAAGCGA AGCGGTAACC GAGCCAAATA ACTTTGTAGA GCATTTCATT GATTCGAGTG GGATTGTTTC ATGGCGCTTT TTCAGCGCAA AACCAGATTA TGAGTTTGTT CAGTGGGACT TCTCTAGCCA TGGTGAAAAC TCGAATGCCG ATGAAGCTGC AACATTGTTT GGCATTCTTA AAGCCATGGG CAAAGAATCT TATGTGGCCG TGTATGACGA GCTTGGTGCA ATTGCCTGTC GCATCTTAGT GCCTGGTTAT TCTGAGGTGT ATCCAGTAGA GGATCTGATT TGGGATAACA CCAATAAAGC GCTATTGTTC CGCAACGATA TTTTGAATTT ATCTCGCTTG GATAATGTCG GTCTTGAAGG ATTGCTTGAG CGCTTAGAAA ACAATGAGCT TGATGAGTAT GGTGACATTG CTACGTTAAT CGGTGTTGAG TTTGATGAGA ATACGGTTTG GGGTCAGCTA ACTGTTCTTG AGCTCAAGCT ACTCATCCAT CTTGCTTTGA GGCAACTAGA TGAAGCACAT GAATTGGTCG GGGCTTTTCT TCAATACAAC GACAACACTA TCGATCGAAA GCTTTTTTAC CAAGCCTTAG ATGCAGTGCT TGAGGTAAAG TTAAATGAGG ATTTAAAGCT TGAGGACTAT ATTGCCAACT TCCGCCGCAT GTTTGGTAAT CCTAGAATGG ATGCTGTAGT AGGCTCCGTG GAAGGCGGCA TCCGGTTCTT TGGTTTAACA CCAACCAGTA CAAAGCTGGA AGGCCTCGAT AGACATCACA AGATGATCGA TAGTTATAGA AAATTGCATG CGGCACGAGC CAAAGCTTCT GCCAGTGGGC AATGA
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Protein sequence | MEIKVNFLDK LRLEAKFDDF TVIADQPIRY KGDGSAPGPF DYFLASSALC AAYFVKLYCE TRNISTDNIR LSQNNIVDPD NRYQQIFKIQ VELPADISAN DRQGILRSIE RCTVKKVVQA GPEFVIEVVE NLDSDAQSLL ALKPAADAST FIAGKDLPLE QTIANMSGVL GNLGIKIEIA SWRNIIPNVW SLHIRDAHSP MCFTNGKGST KESALASALG EYIERLSNNH FYAGTFWGED IGNAEFVHYP SERWFQPGPN DTLPTEILDD YCRTIYDPDG ELRAIHLIDT NSGNVDRGIC SLPYIRQSDG RVVYFPSNLI ENLFVSNGMS AGNTLAEAQV QCLSEIFERA VKREILEGEI ALPDVPQEVI AKYPRILAGI QGLEEQGFPV LVKDASLGGI YPVMCVTLMN PRTGGVFASF GAHPSLEVAL ERSLTELLQG RSLEGLNDLP PPTFASEAVT EPNNFVEHFI DSSGIVSWRF FSAKPDYEFV QWDFSSHGEN SNADEAATLF GILKAMGKES YVAVYDELGA IACRILVPGY SEVYPVEDLI WDNTNKALLF RNDILNLSRL DNVGLEGLLE RLENNELDEY GDIATLIGVE FDENTVWGQL TVLELKLLIH LALRQLDEAH ELVGAFLQYN DNTIDRKLFY QALDAVLEVK LNEDLKLEDY IANFRRMFGN PRMDAVVGSV EGGIRFFGLT PTSTKLEGLD RHHKMIDSYR KLHAARAKAS ASGQ
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