| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2063 |
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| Symbol | |
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| ID | 5052974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2132259 |
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| End bp | 2132825 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640472237 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001156838 |
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| Protein GI | 145590241 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.668188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACAAG CAAGAGTTTT AAATCCACAA GAACTACGCA GAGTTTTAGA TCACGTTGCT
ACACGCAGGC ATTCAGCACG TAATCGCGCT ATGTTGCTAC TTACGCACTA CGCGGGTATG
CGAGTAGCTG AAGTAGCGGC GCTACGCATA AACGACGTTT TAAACGGCGA CAGCACTATT
AAGGGTGAAG TACGCTTAAT GCCCGATCAA ACCAAGGGCA AACACGCCCG TACTGTTTAC
TTAAATGAAC GGATGCAAAA GGAGCTGGCT CAGTACATCA AGATGCTCAA AATCAAAGAC
GCATCAAAGC CCCTGTTTTA CACGCAGAAG CAAGCAGGGT TCTCGGCCAA TTCTCTTACT
CAATACTTCT TTTACCTTTA TCGCGCCTGT GCTCTCGCCG GGGCCAGTAG CCATAGTGGC
AGACGCTCAT TCTTAACTGG ACTTGCCAAC AAAGGCACAG CGATTCATAT ATTGAAAAGT
TTGGCTGGGC ACCGCAACAT CAGCACCACT GCTACCTATC TCTATAGCAG TCCAGATCAG
CTTAAGGCCG CTGTTGAATT AGTCTAA
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| Protein sequence | MSQARVLNPQ ELRRVLDHVA TRRHSARNRA MLLLTHYAGM RVAEVAALRI NDVLNGDSTI
KGEVRLMPDQ TKGKHARTVY LNERMQKELA QYIKMLKIKD ASKPLFYTQK QAGFSANSLT
QYFFYLYRAC ALAGASSHSG RRSFLTGLAN KGTAIHILKS LAGHRNISTT ATYLYSSPDQ
LKAAVELV
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