Gene Pnuc_2024 details

Gene Information

• Locus tag: Pnuc_2024
• ID: 5053187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 2095204
• End bp: 2097111
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640472198
• Product: peptidoglycan glycosyltransferase
• Protein accession: YP_001156799
• Protein GI: 145590202
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0252806
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTTCTT TTAAAAGGGC TGACCTAGAC TCATTTCAAG AGCGCATTCA TATTGCGACT 
TTATTTGTCA CATTCTGTTT TTTGCTATTA ATTACTCGCC TTGTTTGGTT ACAGCTCGTT 
AGCCATGGCA AATATGCCCT GCTGGCAGAG AGTAATCGGA TTGCTTTAGT GCCTGCTCCA 
GCAAACCGCG GCCTCATTAT TGATCGTAAC GGCATCGTGA TTGGTAGGAA TTATTCTGCA 
CTTACCCTGG ATGTGAATGC CGAAGAAGTA AAAGGTAATG TAGATCAGTT AATTAATGAT 
CTTTCAGAAA TCATTGATAT CTCCCCTAGA GATCGCCGTA ACTTCAAGCG CTCCTTAGAA 
GATTCTCGCA ATATGGGCAC CATCCCCCTG CGATCGATGC TTAATGAGAC TGAAACTGCC 
CGTTTTATGG CTAATCGCTA CCGCTTTCCA GGGGTAGAAA TACGTGCCAG GAGCTTTCGG 
GAGTATCCCT ATAACGAATT GGGGTCCCAT TTAATTGGCT ATATTGGTCG CGTTTCTCAG 
AAAGATAAGG AACGCATGCA GGCTGAAATT GAGAACTCCA AAGCAGATGA TCCTGACGCA 
CTGCAGACTT CATTTTTGCC AGGCATTCAG TATGTTGGAA AAATTGGTCT GGAACAAAGC 
TATGAAAGTG TTTTGCGTGG CATACCCGGA TACGATCAAG TTGAAATTAC TGCAGGCGGA 
AAACCAGTTC GTACTCTTTC CAGCTCACCT TCAGTTCCCG GTAAAAACAT TGTGCTGTCA 
GTCGACTTTA AATTGCAATA CTTAGTCGAG CAGTTGTATG GAAATTTCCG CGGAGCATTT 
GTTGCGATCG AACCAGAAAC TGGTGACGTT TTGGCTTTTG TATCTAAGCC AAACTTTAAC 
CCTAATGACT TCGTTGAAGG TATTGATGCC GTTACCTGGA AAGAGCTTAA TGACTCTCCG 
CAAAAACCGC TCTATAACCG CCCGCTCAAA GGCATTTATC CGCCGGGCTC CACTTACAAA 
CCTTTCATGG CGCTCGCCGC TTTAGAAAAT AAAAAACGTA CGCCGACACA AACTATTTTT 
GATCCAGGTT ATTTTGATTT TGGTAACCAC ACATTCCGAG ATGATAAAAA AGGTGGTCAC 
GGCACTGTAG ATATGCAAAA GTCTATTGTG GAGTCTTGTG ATACTTATTA CTACATGCTT 
GCACGCGACA TGGGTGTAAA CATGATTGCG AACTTCATGA AGCCATTTGG CTTTGGCCAA 
ATCACTGGAA TTGATTTGCA AGGCGAGTCT AAGGGGGTTT TGCCTTCGAC CGAATGGAAA 
CAAAATACCT TTAAAAAACC AGAGCAGCAG AAATGGTATG AAGGAGAAAC CATTTCATTA 
GGAATTGGAC AGGGCTACAA CTCCTTTACG ATTTTGCAGC TAGCGCACGC AATGGCGAAT 
CTCGCCAACA ATGGCGTTGT GATGAAACCT CATTTAGTCA AAGCTATTGA GGATCCATTT 
ACCCGCAACA AGGCGCTTAC TACCCCAAAA GAAAGCTATC GCATTGAACT CAATCCCGAA 
AATATTGAGG TTATTAAAAA AGCGATGGTA GAAGTAAATC GCTCCGGAAC ATCTGCGGCA 
GCATTTCAGG GGGCGGGGTA TGTAGCTGGT GGCAAAACCG GTACCGCACA AGTATTTAGC 
TTGAACTCAA AAGATTACAA ACATGGAGCG ACTGCAGAGT TCTTGCGTGA CCATGCTTTA 
TATATTGCAT TTGCTCCTGC AGACAAGCCA ACAATCGTGA TTGCAATGGT TGTGGAGAAT 
GCTGGATTTG GAGCGCAGTA TGCAGCACCG ATCGCACGTA AAGCATTGGA CTATTACATA 
GAGGGCAAAT GGCCTAAGGA GGTTCCCGAA TGGAAAAGAG CCCCGTAA 

 

Protein sequence

MVSFKRADLD SFQERIHIAT LFVTFCFLLL ITRLVWLQLV SHGKYALLAE SNRIALVPAP 
ANRGLIIDRN GIVIGRNYSA LTLDVNAEEV KGNVDQLIND LSEIIDISPR DRRNFKRSLE 
DSRNMGTIPL RSMLNETETA RFMANRYRFP GVEIRARSFR EYPYNELGSH LIGYIGRVSQ 
KDKERMQAEI ENSKADDPDA LQTSFLPGIQ YVGKIGLEQS YESVLRGIPG YDQVEITAGG 
KPVRTLSSSP SVPGKNIVLS VDFKLQYLVE QLYGNFRGAF VAIEPETGDV LAFVSKPNFN 
PNDFVEGIDA VTWKELNDSP QKPLYNRPLK GIYPPGSTYK PFMALAALEN KKRTPTQTIF 
DPGYFDFGNH TFRDDKKGGH GTVDMQKSIV ESCDTYYYML ARDMGVNMIA NFMKPFGFGQ 
ITGIDLQGES KGVLPSTEWK QNTFKKPEQQ KWYEGETISL GIGQGYNSFT ILQLAHAMAN 
LANNGVVMKP HLVKAIEDPF TRNKALTTPK ESYRIELNPE NIEVIKKAMV EVNRSGTSAA 
AFQGAGYVAG GKTGTAQVFS LNSKDYKHGA TAEFLRDHAL YIAFAPADKP TIVIAMVVEN 
AGFGAQYAAP IARKALDYYI EGKWPKEVPE WKRAP