Gene Pnuc_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2012 
SymbolslmA 
ID5053605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2084332 
End bp2084982 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content48% 
IMG OID640472186 
Productnucleoid occlusion protein 
Protein accessionYP_001156787 
Protein GI145590190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAAT CTTTAGATCC AGCAAACATC AACGACAGCA ATGCTGACGC TGGTAAAGCT 
CGTAAGCGAC CACGCCCAGG CGAACGCCGT CTTCAAATTC TGCAAGTGCT AGCAGAGATG
TTGCAGAACC CTAAGGGTGA GCGGGTTACT ACCGCAGCCT TAGCTGCCAA GATTGATGTT
TCTGAAGCTG CCTTGTATCG GCATTTCGCT AGTAAAGCGC AAATGTTTGA GGGGCTGATT
TCTTTTATTG AGCAAACTGT TTTCGGCTTG ATTAATCAGA TTAATCAAAA AGAAGAATCG
GGTCTTGCGC AGGCACGAGG CATCTTGCAG ATGCTCTTGT ACTTTGCAGA AAAGAATCCA
GGCATGACGC GTGTTTTATT GGGCGATGCT TTATTACAAG AAGACGATCG CTTGCAGGAG
CGTATTACTC AAGTGCTGGA TCGTGTTGAG GCTTCTCTTA AGCAGGCCCT GCGCATTGCT
CAAACCCAAG GTGGTAACTG GGCGCAGCTG GGTCAAGAAG AGGTTAGTAT TCGCGCTGCC
ATGTTGATGA GTTTTGTTTT AGGCCGTTGG CATCGTTTTG CGCGTAGCGG ATTTAAGAAG
CTCCCAACGG AAGCCTCCGA TGTTAGTTTG CGCCTTCTAT TGTCAGAATG A
 
Protein sequence
MRESLDPANI NDSNADAGKA RKRPRPGERR LQILQVLAEM LQNPKGERVT TAALAAKIDV 
SEAALYRHFA SKAQMFEGLI SFIEQTVFGL INQINQKEES GLAQARGILQ MLLYFAEKNP
GMTRVLLGDA LLQEDDRLQE RITQVLDRVE ASLKQALRIA QTQGGNWAQL GQEEVSIRAA
MLMSFVLGRW HRFARSGFKK LPTEASDVSL RLLLSE