| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2002 |
|---|
| Symbol | |
|---|
| ID | 5052656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 2074071 |
|---|
| End bp | 2075516 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640472176 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_001156777 |
|---|
| Protein GI | 145590180 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG TATCTGATTT AAATAACTTT GTAGCAACTC GTTGCGCAAT TGCTGATATT
TCATTGTCCG ATTTTGGTCG TAAAGAAATT GCGATTGCCG AGACTGAGAT GCCGGGCTTG
ATCGCCATTC GTGATGAATT TGCTGCACAA CAGCCATTAC GTGGTGCACG CATTACTGGT
TCATTGCATA TGACCATTCA AACTGCGGTA TTAATCGAGA CGCTTGAGGC GCTTGGTGCT
GAAGTGCAAT GGGCTTCTTG CAATATTTTC TCTACACAAG ACCACGCAGC GGCAGCCATT
GCTGCTAACG GCACACCAGT ATTCGCAATT AAAGGCGAAA CCCTCGAGCA GTACTGGGAC
TTCACCCATC GTATTTTTGA GTGGGCTGAT GGCGGTTACA CCAATATGAT TTTGGATGAC
GGTGGCGATG CTACTTTGTT ATTGCACCTT GGTGCACGCG CTGAAAAAGA TCAAGCTTGC
TTGAATAATC CAACTAGCGA AGAAGAAACC ATTTTGTTTG CAGCCATTAA GAAAAAATTG
GCGCAAGATC CAACTTGGTA TTCAACACGC TTAGAAAAAG TGAAGGGCGT GACTGAAGAA
ACTACTACCG GTGTACATCG CTTGTATCAA ATGTTTGCCA AGGGCGAATT GAAGTTCCCC
GCGATTAACG TCAATGACTC TGTGACTAAA AGTAAGTTCG ATAATCTCTA TGGTTGCCGT
GAGTCCTTAG TTGATGCGAT CAAGCGTGCA ACAGACGTGA TGGTTGCAGG TAAGGTTGCA
GTAGTTTGCG GCTACGGCGA TGTGGGTAAA GGCTCAGCCC AAGCATTGCG TGCACTATCT
GCTCAAGTAT GGGTTACTGA AGTAGATCCA ATCTGCGCAT TACAAGCTGC CATGGAAGGC
TATCGTGTTG TAACAATGGA TTACGCTGCT GATAAAGCTG ACATCTTTGT TTCTGCAACT
GGTAACTACC ACGTGATTAC ACATGACCAT ATGGCCAAGA TGAAGAATCA AGCCATCGTT
TGTAATATCG GCCACTTCGA TAATGAGATC GATGTTGCGG GCATTGAAAA ATATAAATGG
GAAGAGATCA AGCCACAAGT TGACCATGTG ATTTTCCCGG CTGCCAATGG CAAGCCTGAA
AAGCGCATCA TCATTTTGGC CAAAGGTCGT TTGGTGAATC TAGGTTGCGG TACAGGACAC
CCTTCTTATG TCATGAGCTC TTCATTTGCA AACCAAGTGA TTGCACAGAT TGAATTGTGG
AATGCAGTAG GTACAGATAA ATACCCAATT GGTGTTTACA CATTGCCTAA GCATTTGGAT
GAGAAGGTTG CCCGTTTACA GCTCAAAACT CTCAATGCAG AATTAACTGT GTTATCAGAT
CAGCAAGCTT CTTACATTGG TGTGACAAAG GAAGGCCCAT ACAAGGCTGA CCACTATCGT
TATTAA
|
|---|
| Protein sequence | MNTVSDLNNF VATRCAIADI SLSDFGRKEI AIAETEMPGL IAIRDEFAAQ QPLRGARITG
SLHMTIQTAV LIETLEALGA EVQWASCNIF STQDHAAAAI AANGTPVFAI KGETLEQYWD
FTHRIFEWAD GGYTNMILDD GGDATLLLHL GARAEKDQAC LNNPTSEEET ILFAAIKKKL
AQDPTWYSTR LEKVKGVTEE TTTGVHRLYQ MFAKGELKFP AINVNDSVTK SKFDNLYGCR
ESLVDAIKRA TDVMVAGKVA VVCGYGDVGK GSAQALRALS AQVWVTEVDP ICALQAAMEG
YRVVTMDYAA DKADIFVSAT GNYHVITHDH MAKMKNQAIV CNIGHFDNEI DVAGIEKYKW
EEIKPQVDHV IFPAANGKPE KRIIILAKGR LVNLGCGTGH PSYVMSSSFA NQVIAQIELW
NAVGTDKYPI GVYTLPKHLD EKVARLQLKT LNAELTVLSD QQASYIGVTK EGPYKADHYR
Y
|
|---|
| |