| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1997 |
|---|
| Symbol | |
|---|
| ID | 5052513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 2068449 |
|---|
| End bp | 2069579 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640472171 |
|---|
| Product | polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_001156772 |
|---|
| Protein GI | 145590175 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT ATGCCGTCGG CGGCGCAATT CGCGACACCT TGATGAGTTT ACCGGTTCAC
GATATTGACT ATGTTGTTGT GGGCTCGAGT GTTGAGGAGA TGGTTGCTAA AGGCTTTCGA
CCAGTTGGTA AAGATTTTCC TGTTTTTTTG CATCCAGACA CACAGGCTGA ATATGCCTTA
GCCCGTACCG AAAGAAAAAC AGGTAAAGGG TATAAAGGTT TTCATTTTTA TGCTGATCCA
TCGGTAACTC TAGAGCAAGA CCTAGAGCGT CGTGATTTAA CCATCAATGC AATGGCGCAA
GAAGTGGGGC TAGATGGAAC ATGGATTGGG CCGATCCTAG ATCCCTATAA CGGACAAGAG
GATTTAGCTG CCAAAGTATT TAGACATGTA TCAGATGCAT TTGCAGAGGA TCCATTGCGT
CTTTTACGCA TCGCACGCTT TGCTGCTCGC TTTCCAGAAT TTAGCGTTGC CGATGAAACG
ATGATCGCTT TGAAAGCCAT TGTTCAATCG GGTGAGTTAG CGGCTTTATC GGCAGAGCGT
ATTTGGCAAG AGTTAGCCAG GGGAATGACT GCGGCAAAGC CCATGCATAT GTTTCAAGTC
TTATTGAATA CGGGCGCTGC AAAGACTTTC CTGCCGGCCA CATTAACCAA TCAACTTGCA
CAAGAAGTAT TCCGTGAAGA GTTGATATCT CATTATGAGT TAGTTGGGAA TTATTTAGAA
GAGCGTTGTG CTGTAACGCT GATGAGGCTA CCTTCAAGTG AGATTCGTTC ATGGGCAGAC
TGTGTTCGCA TGCCAACAGA GGTGCGTGAT TTTTCCGAGA TCTTTAGTGA GCTCAATACA
CTCATCCTGA AAACTACTGA GGGTAAATTT CAGGCTGTTG ATGTTTTAGC TTGGTTCAAT
CGTGCCGATG TTTGGCGTAA GCCAGATCGT GGTCAAGCTT TATTAAGGTT GGCCGAACAA
TTAGGCCTAC CTGTTTCCAC CCTGATTCAA TCAATGAGAA ATGCTCAGGC TATCAATACG
GCAGAGATCA TTGCTACTGT GGCAGCAGAA GATCGCTCTA ACGGTGATCG TATTGGGAGT
GCTTTTTGGG CAGCAAGACT GGCAGCGATT TCTGCCGCGC TCCAGTCTTA G
|
|---|
| Protein sequence | MKIYAVGGAI RDTLMSLPVH DIDYVVVGSS VEEMVAKGFR PVGKDFPVFL HPDTQAEYAL
ARTERKTGKG YKGFHFYADP SVTLEQDLER RDLTINAMAQ EVGLDGTWIG PILDPYNGQE
DLAAKVFRHV SDAFAEDPLR LLRIARFAAR FPEFSVADET MIALKAIVQS GELAALSAER
IWQELARGMT AAKPMHMFQV LLNTGAAKTF LPATLTNQLA QEVFREELIS HYELVGNYLE
ERCAVTLMRL PSSEIRSWAD CVRMPTEVRD FSEIFSELNT LILKTTEGKF QAVDVLAWFN
RADVWRKPDR GQALLRLAEQ LGLPVSTLIQ SMRNAQAINT AEIIATVAAE DRSNGDRIGS
AFWAARLAAI SAALQS
|
|---|
| |