Gene Pnuc_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1993 
Symbol 
ID5053751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2065041 
End bp2065949 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content45% 
IMG OID640472167 
ProductC32 tRNA thiolase 
Protein accessionYP_001156768 
Protein GI145590171 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGATA TTCGTAAAGT CGTCTTCGAA GAAAATAAGC TGGAGAAAAA ACTCTGTCGC 
TTAGTGGGCC AGGCTATTGG TGACTTTGGC ATGATTGAAG ATGGCGATAA AGTGATGGTC
TGCGTATCAG GCGGCAAAGA TAGTTATGCC ATGCTCGATA TTTTGATGAA GTTGCGAGAG
CGCGCACCAA TTGATTTTGA GATTGTTGCT GTTAACTTGG ATCAAAAACA ACCAAATTTC
CCTGCAGAGA CTTTACCTAA TTACCTAAGG AGCTTGGGCA TTCCTTTTCA TATTGAAGAG
CAAGATACCT ATAGTATTGT GAAGCGCGTA ATCCCAGAGG GTAAAACGAC TTGCGGCTTA
TGTTCTCGTT TGCGTCGCGG CATTTTGTAT CGCGTGGCTG ATGAGCTAGG CGCTACCAAG
ATTGCTTTAG GACATCACCG TGATGACATT CTTGAAACGC TCATGCTCAA CATGTTTTAT
GCGGGTAAAT TGAAGGGCAT GCCACCCAAG CTGCGCTCCG ATGATGGCAA ACATATTGTT
ATTCGTCCTT TGGCCTACGT TCCTGAAAAA TTACTTGAAC GATACGCAAT TGATATGAAT
TTCCCCATCA TTCCTTGTGA TCTATGCGGT AGCCAGCCCA ATCTTCAGCG CCAAGTAATG
AAAGAAATGT TGCGTGATTG GGAAAAGAAA CACCCTGGTC GCGTAGAGAA TCTCTTCCGG
TCCATGCACC ACATCGTGCC CTCACATTTG ATGGATGGCG AGGCATTTGA TTTCAAAAAT
CTAGAGATTT CTACTGAGCT ATCCGGAATT GCCGCAAGAT CGAGTGGCGA TCGGGCTATC
GATGAGGCAG ATTTGGATGA ATTGGCTTGT GGAACCATGA TTCAGGGGAC TTATAATCCC
TCTTTATGA
 
Protein sequence
MGDIRKVVFE ENKLEKKLCR LVGQAIGDFG MIEDGDKVMV CVSGGKDSYA MLDILMKLRE 
RAPIDFEIVA VNLDQKQPNF PAETLPNYLR SLGIPFHIEE QDTYSIVKRV IPEGKTTCGL
CSRLRRGILY RVADELGATK IALGHHRDDI LETLMLNMFY AGKLKGMPPK LRSDDGKHIV
IRPLAYVPEK LLERYAIDMN FPIIPCDLCG SQPNLQRQVM KEMLRDWEKK HPGRVENLFR
SMHHIVPSHL MDGEAFDFKN LEISTELSGI AARSSGDRAI DEADLDELAC GTMIQGTYNP
SL