Gene Pnuc_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1972 
Symbol 
ID5052680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp2041173 
End bp2041958 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content42% 
IMG OID640472147 
Producthypothetical protein 
Protein accessionYP_001156748 
Protein GI145590151 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CAAAGATTAA CTTTGGAGTA GTGAAACATC GTCGCTTTAG ACCGGCCTCG 
AATGCATTTG GTTATGGTGT TTTTACACTG TCTATACCAA TGCGTACTCG CAAAATACAT 
CCAGAAATTC TAAGTGAGCG CGGCCTCAAA GACAACCGTA GCGGTCTATT CTCTTTTTTT 
GATAAAGACC ATGGGCTGGG TGGTTCAGAT AGCTTGGCAT GGATTGAAAA AATCTTAAAA 
GACAATGGCA TTCATCATGA CGATGGTGAA ATTTGGCTTC ATACTTTTCC TAAAGTTCTG 
GGGTATGTAT TTAATCCTGT GAGTTTTTGG GTATGCACTC AAACAGATGG GCAAGTGATT 
GCGGTGCTAG CAGAAGTGAA CAATACTTTT GGAGAACGTC ACTGTTATCT ATTACATAAA 
GATTCTAATG AGCCCCTCCG CTCAGGAGAA ACACTCACTA GTAAAAAAGT ATTTCACGTG 
TCTCCGTTTT GCGAGGTTCA AGGGGAGTAT CGTTTTCGCT TCCTCTTTCC CCAAGATAGT 
CTCAGTAAAA ACAATGCTGT TTACCGCATT GAACTACATG AAGACCAACT CCCACTCATC 
CATACCAGTA TTAGCGGTAC CAGTCGCCCA CTAAGCCAAT CCGCTTTATT GCTTGCCTTC 
ATGCGCTACC CCCTGATGAG TTGGGGAGTA ATTTTCCGCA TTCATTGGCA GGCATTGAAA 
TTATGGCTAA AAGGTGTACC CTTTCATTCA AAGCCAAATC CACCTGAATT AGAAGTCAGT 
AAATGA
 
Protein sequence
MNQPKINFGV VKHRRFRPAS NAFGYGVFTL SIPMRTRKIH PEILSERGLK DNRSGLFSFF 
DKDHGLGGSD SLAWIEKILK DNGIHHDDGE IWLHTFPKVL GYVFNPVSFW VCTQTDGQVI 
AVLAEVNNTF GERHCYLLHK DSNEPLRSGE TLTSKKVFHV SPFCEVQGEY RFRFLFPQDS 
LSKNNAVYRI ELHEDQLPLI HTSISGTSRP LSQSALLLAF MRYPLMSWGV IFRIHWQALK 
LWLKGVPFHS KPNPPELEVS K