Gene Pnuc_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1942 
Symbol 
ID5053560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2017754 
End bp2018497 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID640472117 
Productphosphoribosyltransferase 
Protein accessionYP_001156718 
Protein GI145590121 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTC TAGAGAATAT TTTTCAATCA ATTGCAACAC AGATTTTGCC AACAGCATGC 
ATTAGTTGTG GCCACCATCA ACAACATCCT ATTTGCGAAA AATGCTTAGA TCTATTGGGG
ATAGAAAGCC TCTTGAATTT TGAATGCTGC CAACAATGCG GTCTTTTACT GCATAGTTCA
GAAGTACAAA AACAACTATG CACCAACTGT GTAATCAAGC CACCCTATTT TGATGCTACC
TGCTGCCTAG ATCGATATGA GGGAAGATTG CAAGCAGCGT TACACCTCCT CAAGTATCAA
AAAAGAGTAG CTAATGCGCA CGGTCTTGCA TATGCCTGGA ACGCAATCCT CTCTCCACAT
CTACAAGAGC AATATGCAGA TTGCTTGTTA CCCGTTCCCC TTAGTCATGA AAAATTAAAG
ATACGCGGAT TTAATCAAAG CTGGGAATTA GCCAGAAGGG TGGAGTCCCG GAAAACAATT
CAAAAATTGC CTTATGCATT AAGGCGACAT CACAATATAG GACAGCAAGC CGGGAGCACT
CTCATTGGAC GCCATGATTC AATCCAGAAT ATGTTTTTTA TTGACACAAA GTACCTGGAT
TTCCTTAAAG ATAAAACTGT CGTTGTGTTT GATGATGTCA TGACGAGCGG AGCAACCCTT
AATGAGATCG CTCGTATTCT GAAAGAAAGC GATGTAAAGC GTGTCATCAA CTGGGTTTTA
CTAAGAACCA CTAAGCAGAT CTAA
 
Protein sequence
MRFLENIFQS IATQILPTAC ISCGHHQQHP ICEKCLDLLG IESLLNFECC QQCGLLLHSS 
EVQKQLCTNC VIKPPYFDAT CCLDRYEGRL QAALHLLKYQ KRVANAHGLA YAWNAILSPH
LQEQYADCLL PVPLSHEKLK IRGFNQSWEL ARRVESRKTI QKLPYALRRH HNIGQQAGST
LIGRHDSIQN MFFIDTKYLD FLKDKTVVVF DDVMTSGATL NEIARILKES DVKRVINWVL
LRTTKQI