Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1942 |
Symbol | |
ID | 5053560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 2017754 |
End bp | 2018497 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640472117 |
Product | phosphoribosyltransferase |
Protein accession | YP_001156718 |
Protein GI | 145590121 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTTC TAGAGAATAT TTTTCAATCA ATTGCAACAC AGATTTTGCC AACAGCATGC ATTAGTTGTG GCCACCATCA ACAACATCCT ATTTGCGAAA AATGCTTAGA TCTATTGGGG ATAGAAAGCC TCTTGAATTT TGAATGCTGC CAACAATGCG GTCTTTTACT GCATAGTTCA GAAGTACAAA AACAACTATG CACCAACTGT GTAATCAAGC CACCCTATTT TGATGCTACC TGCTGCCTAG ATCGATATGA GGGAAGATTG CAAGCAGCGT TACACCTCCT CAAGTATCAA AAAAGAGTAG CTAATGCGCA CGGTCTTGCA TATGCCTGGA ACGCAATCCT CTCTCCACAT CTACAAGAGC AATATGCAGA TTGCTTGTTA CCCGTTCCCC TTAGTCATGA AAAATTAAAG ATACGCGGAT TTAATCAAAG CTGGGAATTA GCCAGAAGGG TGGAGTCCCG GAAAACAATT CAAAAATTGC CTTATGCATT AAGGCGACAT CACAATATAG GACAGCAAGC CGGGAGCACT CTCATTGGAC GCCATGATTC AATCCAGAAT ATGTTTTTTA TTGACACAAA GTACCTGGAT TTCCTTAAAG ATAAAACTGT CGTTGTGTTT GATGATGTCA TGACGAGCGG AGCAACCCTT AATGAGATCG CTCGTATTCT GAAAGAAAGC GATGTAAAGC GTGTCATCAA CTGGGTTTTA CTAAGAACCA CTAAGCAGAT CTAA
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Protein sequence | MRFLENIFQS IATQILPTAC ISCGHHQQHP ICEKCLDLLG IESLLNFECC QQCGLLLHSS EVQKQLCTNC VIKPPYFDAT CCLDRYEGRL QAALHLLKYQ KRVANAHGLA YAWNAILSPH LQEQYADCLL PVPLSHEKLK IRGFNQSWEL ARRVESRKTI QKLPYALRRH HNIGQQAGST LIGRHDSIQN MFFIDTKYLD FLKDKTVVVF DDVMTSGATL NEIARILKES DVKRVINWVL LRTTKQI
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