Gene Pnuc_1924 details

Gene Information

• Locus tag: Pnuc_1924
• Symbol: coaD
• ID: 5053710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: -
• Start bp: 2001930
• End bp: 2002427
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640472099
• Product: phosphopantetheine adenylyltransferase
• Protein accession: YP_001156700
• Protein GI: 145590103
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0669] Phosphopantetheine adenylyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain; [TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGTTG CTGTATACCC CGGAACATTT GATCCCTTTA CCCGTGGGCA TGAAGATTTA 
GTTCGTCGTG CTTCTAGTAT TTTTAGTGAG CTGATCGTCG GTGTTGCCGA TAGCCGCAGC 
AAGCGTCCTT TTTTCGGGCT GCAAGAGCGT ATCGATATTG CTAAGGAAGT TTTAGGTCAC 
TACCACAATG TCAAGGTCGT TGGTTTTTCA GGCTTGTTAA AAGATTTTGC CCGAGAGCAC 
AATGCTCGCG TGATTGTGCG TGGTTTACGT GCCGTATCTG ACTTTGAATA TGAGTTCCAG 
ATGGCCGGCA TGAATCGTTA TCTTTTGCCA GACGTTGAAA CTTTATTTTT AACCCCATCT 
GATCAATACC AATTTATCTC GGGCACCTTT GTTCGTGAGA TTGCTTCAAT GGGTGGTGAT 
GTGAGTAAAT TTGTATTCCC ATCGGTAGAA AAATGGCTCG TCCAAAAGAT TGCCTCTGGC 
ACTCAGCATT CTGAGTAG 

 

Protein sequence

MTVAVYPGTF DPFTRGHEDL VRRASSIFSE LIVGVADSRS KRPFFGLQER IDIAKEVLGH 
YHNVKVVGFS GLLKDFAREH NARVIVRGLR AVSDFEYEFQ MAGMNRYLLP DVETLFLTPS 
DQYQFISGTF VREIASMGGD VSKFVFPSVE KWLVQKIASG TQHSE