| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1921 |
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| Symbol | |
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| ID | 5052442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2000323 |
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| End bp | 2000964 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640472096 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001156697 |
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| Protein GI | 145590100 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAG TTGCCTTTGA AAGAAGCGTA CAGGGAACGG GTGCGAGCCG CCGTCTGCGC
AATTCCGGAA AAACTCCGGG AATCGTTTAC GGTAGTAAAG ATCCAGCCTT GGTCATTGAG
TTAGACCACA ACGCGTTGTT CCATGCTCTC CGCAAGGAAG CGTTCCACTC ATCCATTTTA
GATTTGGAAA TCGACGGTAA AGCACAGAAA GTGTTGTTAC GCGATTACCA AATGCATCCA
TTTAAGCCAT TGGTTTTGCA CATTGACTTC CAGCGCGTAT CCGCTTCTGA GAAAGTTCAT
ATGCGCGTTC CATTGCACTT CACTAATGCT GACACTTCAG CTGCCGTGAA ATTGCAAGGC
GCTGTTATCA GCCACATCCT TACTGAACTC GAAGTTTCTT GCTTACCAGC AGACTTGCCA
GAGTTTGTTG AAGTGGACTT GGCCAAGATT GAAGTTGGAC ATGGTATTCA TGCTAAAGAC
ATCGCATTGC CAAAAGGTGT TACTTTGGTA TTGCATGTTG AACAAGAGAA TCCAGTACTT
GCCAATGCAC GTATCCCAGC GGTTAAAGCT GCTGAGCCTA CGGATGCTCC TACTGCACCA
GCAGCCGCTC CTGGGGCTGA AGCACCAAAG GATAAGGCTT AA
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| Protein sequence | MKVVAFERSV QGTGASRRLR NSGKTPGIVY GSKDPALVIE LDHNALFHAL RKEAFHSSIL
DLEIDGKAQK VLLRDYQMHP FKPLVLHIDF QRVSASEKVH MRVPLHFTNA DTSAAVKLQG
AVISHILTEL EVSCLPADLP EFVEVDLAKI EVGHGIHAKD IALPKGVTLV LHVEQENPVL
ANARIPAVKA AEPTDAPTAP AAAPGAEAPK DKA
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