Gene Pnuc_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1920 
Symbol 
ID5052595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1999222 
End bp2000187 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID640472095 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001156696 
Protein GI145590099 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCCA CAAACGCAGA TTTATTGACT TTATTTACAG GCAACGCAAA TCCGGTTTTG 
GCTGAGGCAG TAGCCAAAGA GCTCAAGCTC CCTATGGGAA AAGCCTTTGT AGGACGTTTC 
TCAGACGGTG AAATCCAAGT AGAAATTCAA GAAAACGTTC GCGGCAAAAA CGTGGTGGTC 
ATTCAATCGA CCTGTGCTCC AACAAATGAC AGTTTGATGG AGCTCATGAT CATGATTGAT 
GCCCTCAAGC GCGCTTCTGC AAGCCGCATC ACCGCAGTGA TTCCTTACTT TGGCTATGCT 
CGTCAAGATC GTCGTCCCCG CTCAGCTCGT GTGGCTATCT CCGCTCGCAT CGTAGCCAAT 
ATGCTTCAAT CGGTTGCCGG CATTGAGCGT GTTTTGACCA TGGATCTTCA TGCCGACCAA 
ATTCAGGGCT TTTTTGATAT CCCGGTAGAT AACATCTATG CGTCTCCAGT GCTGTTGGCT 
GATCTACAGG CACAGAAGAC CCAAAAAGAC CTCATCATCG TCTCTCCCGA CATTGGGGGC 
GTAGTACGTG CCCGTGCCAT GGCAAAGCAA TTAGGCACTG ATTTAGCGAT TATTGATAAA 
CGTCGCCCTA AAGCCAACGT CTCCGAAGTG ATGCACTTAA TCGGCGAAGT AGAAGGCCGC 
CATTGCGTGA TCATGGATGA CATCATCGAT ACTGGCGGCA CCCTCTGTAA GGCTGCTGAA 
GCCCTTAAAG AGCGTGGCGC TAAGGGTGTT ACTGCCTATT GCACCCATGC CGTTCTATCA 
GGCGGTGCAG TGGCCAGAAT TGCAGCGTCT GAATTGGATG AATTAGTGGT TACAGACACT 
ATTCCCCTCA CCCCAGAAGC GATGAAAGTC ACCAAAATTC GTCAATTGAC TGTTGCCCCA 
CTGCTTGCCG AGACTCTTTC TCGCATTAGC AAAGGTGATT CAGTCATGTC CATGTTTGCC 
GAATAA
 
Protein sequence
MSSTNADLLT LFTGNANPVL AEAVAKELKL PMGKAFVGRF SDGEIQVEIQ ENVRGKNVVV 
IQSTCAPTND SLMELMIMID ALKRASASRI TAVIPYFGYA RQDRRPRSAR VAISARIVAN 
MLQSVAGIER VLTMDLHADQ IQGFFDIPVD NIYASPVLLA DLQAQKTQKD LIIVSPDIGG 
VVRARAMAKQ LGTDLAIIDK RRPKANVSEV MHLIGEVEGR HCVIMDDIID TGGTLCKAAE 
ALKERGAKGV TAYCTHAVLS GGAVARIAAS ELDELVVTDT IPLTPEAMKV TKIRQLTVAP 
LLAETLSRIS KGDSVMSMFA E