| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1899 |
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| Symbol | |
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| ID | 5053000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1974311 |
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| End bp | 1978150 |
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| Gene Length | 3840 bp |
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| Protein Length | 1279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472073 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001156675 |
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| Protein GI | 145590078 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.967348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTC CACTAGCTTT GAATCAGTTG TTGGACGCCG AGGCGGGATC ACCCCGCCTG
CGTGAAATTC CCTACAACTA CACCTCTTTC TCTGATCGTG AGATTGTTAT TCGCTTATTG
GGCGAGGAGT CTTGGCGCGT TCTAAATGAG CTGCGCGGCG TACGTCGTAC AGGCCGTTCT
GCTCGCATGC TATTTGAAAT CTTGGGTGAT ATCTGGGTCG TTCAACGTAA CCCGTTTTTG
CAAGATGATT TATTGGATAA CGCCAATCGC CGTCAGCAGT TGATCGATGC TCTTTGGCAT
CGTTTGGGTG AGGTAAAAAA ACGAAATGTA GGTGACTCTG CAGAACAAGT AGAAGTTTTG
TTGAGCGCTG CTTATCGTGC AGTTGAAAAT TTCCAAAATG GTTTTAAAGA AGTAGAGCAA
ATTCGCAAAC GTGCGCGCAA AGAATTAGGC CGCCATACAG CAAGTGACAA TATTTGTTTT
GATGGTATTT CGCGTGCAGC GCATGTGACT GATGCAACCG ACTGGCGTGT TGAATTTCCT
TTGGTAGTTC TCAAGCCTGA CTACGAATCT GAAATTCCTG GTTTAGTAAA AGCATGCGTT
GAGTTAGGCT TAACCATTAT TCCTCGTGGA GGCGGCACTG GCTATACCGG TGGTGCTATT
CCTCTCTATG CAATGTCTGC GGTAATTAAC ACCGAGAAGT TGCAAGACAT CGGTGGAGTG
AAATCGAAGC GCTTGCCTGG AATGGATCGC GAGGTATCTA CTATCTTTAC AGGTGCAGGC
GTAGTAACAC GCCGTGTATC TGATGCTGCA GAGCACGCAG GGCTGGTCTT TGCGGTCGAT
CCGACATCGG CTGATGCTAG TTGTATCGGT GGCAATATTG CGATGAATGC TGGCGGTAAG
AAGGCGGTTC TTTGGGGGAC TGCTTTAGAT AATCTCGCTA GCTGGCGCAT GGTCGATCCC
GAAGGGAATT GGTTGGATAT TGAGCGACTC GAGCACAATA TGGGCAAGAT CCATGATGTA
GCAACAGTAC GTTTTCAATT AACTTGGTCT GATGGCAATA GTGAACCAGG CGAACGTATT
TTAAAAACAG AGCTATTAGA AGTTGAAGGT AAACGTTTTC GTAAAGAAGG TTTAGGCAAA
GACGTTACTG ACAAATTTTT ATCAGGCTTA CCAGGTGTGC AAAAAGAAGG TTGCGACGGT
TTAATTACTA GCGCAACTTG GGTATTGCAT CGTATGCCGA AATATATGCG CACTGTTTGC
CTGGAGTTTT TTGGCCAAGC GCGTGAAGCG ATTCCAAGCA TTGTCGAGAT TAAGGCTTAC
TTAGACGGCT TGAGCAAGCA AGGCGGTCCA ATTTTGGCCG GCCTTGAGCA TCTGGATGAT
CGCTACTTGA GGGCGGTCGG TTATTCAACT AAATCTAAGC GCAACAGTTT GCCTAAGATG
GTTTTGATTG GCGATATTGC TGGCGATGAT GAGGAAGCGG TAGCTGCTGC GACCAGTGAA
GTGGTGCGCA TGGCGAATTT GCGTGTCGGC GAAGGTTTTG TTGCTGTAAG CGCTGAAGCT
CGTAAGAAGT TCTGGTTAGA TCGTGCCCGT ACTGCCGCCA TTGCTCGTCA TACCAATGCC
TTCAAGATTA ATGAAGACGT CGTGATCCCC TTGCCACGTA TGGGTGAGTA CACCGATGGT
ATTGATCTTA TCAATATTGA ACTTTCGCTT AAAAATAAAT TACAAGTACT GGATGCGCTT
GAATCATTTT TAACTAAGAG CGCATTACCT TTAGGTAAAA GTGATGAGGA TTATGAAATC
CCAACAGCAG AAATTTTGGG GGATCGTGTT CAGCAAGCTC TGGAATTGAT TGCAACCGTA
CGTGCGCGGT GGGCTGAGTG GCTCATGCAG ATGGATACCT ATTTCCCGCA ATTGCAGAAT
TACAGCTTGC GTGCTTCATG GAAAGAAGAG GTTCGTTCAG AGCTACGCAT TATCTTTGGC
GGCTTGGTAT TTGAGCCAAT CTTGAATGAA CTAGAAGCTA TCCATAAAAA CATTTTGCGT
AAGCGCGTAT TTGTGGCCCT GCATATGCAC GCAGGCGACG GGAATGTTCA TACCAATATT
CCAGTGAACT CCGATGATTA CGAGATGTTG CAAGATGCGC ATCGTGCCGT TGATCGGATT
ATGAAATTAG CTCGCTCATT AGATGGCGTG ATTTCTGGAG AGCATGGTAT TGGTATTACC
AAATTGGAAT ATTTGACCGA AGCAGAGCTA AAAGACTTCC GCAGCTATAA AAATCGTGTT
GACCCAGAGG GCCGTTTTAA CAAAGGTAAG TTGATGCCGA ATGCTGATCT CAGCATGGCT
TACACACCGA GTTTTGGTCT GATGGGGCAT GAATCTATCA TCATGCAGCA AAGTGATATT
GGTGCGATTG CTGATAGCGT TAAAGATTGT TTGCGTTGCG GAAAGTGCAA ACCTGTCTGC
TCAACACATG TGCCGCGCGC TAATTTGCTT TACAGCCCAC GAGACAAGAT TTTGGCGACT
TCATTATTAA TTGAGGCCTT CTTGTACGAA GAGCAAACGC GGCGAGGAGT TTCTATTCGC
CATTGGGAAA TGTTTGATGA TGTGGCTGCG CATTGCACGG TCTGTCATAA ATGCTTGACT
CCATGCCCTG TCAATATTGA CTTTGGTGAG GTGACCATGA ATATGCGCAA TCTTTTGCGC
AAAATGGGTC AGCAGCGTTT TAACCCTGGA ACAGCTGCAT CGATGTTCTT CTTGAATGCC
ACTAGCCCAG AAAGTATTAA TTTGGCACGC AAGACCATGA TTGGTTGGGG TTATAAGTTA
CAACGCTTAG GTAATGATGT GTTGCGCAAG TTTGCCAAGA AACAAACTGC ACACCCGCCA
GCAACAGTCG GCAAACCGAC CGTAACGGAG CAGGTTATCT TCTTTGTGAA TAAGAAGATG
CCGGGAAATC TCCCTAAGAA AACGGCACGT GCCTTGTTGG ATATCGAGGA TGCAAACTAC
GTTCCAATTA TTCGAGATCC AAAAACAACC TCTTCGGATA CTGAGGCAGT GTTTTATTTC
CCGGGTTGTG GATCTGAGCG TTTGTTCTCT CAAGTAGGAT TGGCTACTCA AGCGATGTTA
TGGAATGTAG GAGTACAAAC GGTTCTTCCA CCAGGCTATC TATGCTGTGG TTATCCACAA
CGGGGTAATG GCGACTTTGA TAAAGCTGAA AAGATGATTA CGGATAACCG TGTCTTATTC
CATCGTGTTG CCAATACTTT GAATTACCTA GACATCAAGA CTGTGGTTGT CTCTTGCGGG
ACTTGTTATG ACCAGTTGGC TGGCTATCAG TTTGAGCAGA TTTTCCCTGG TTGCCGAATT
ATTGATATCC ATGAGTTTTT GGCAGAGAAG GGCGTTAAGC TCTCTGGTGT TACAGGCGTG
AAGTACATGT ATCACGATCC TTGCCACTCT CCGATGAAGC TTCAGGACCC ATTGAAGACA
GTGAATGAAT TAATTCAGCT GGAAGATGGC AAAGCGATTC AAAAGAATGA TCGTTGCTGC
GGTGAATCTG GAACTTTGGC TGTGACACGT CCTGACATCT CTACCCAAGT GCGTTTCCGC
AAGCAAATTG AAATGGAAAA AGGCGCCAAT GATTTACGTA AGGGTGATTT CACTGGTGAT
GTCAAAGTGC TTACCAGCTG CCCATCGTGT TTACAGGGCT TAACGCGTTT TGATGCCGAT
AGCGATACCA CGGCTGATTA CATTGTGGTG GAGATGGCTC AAAAATTGCT AGGTGAAAAC
TGGATGCAAG AGTATGTTGC TAAGGCTAAT CAAGGTGGTA TTGAGAGGGT ATTGGTTTAA
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| Protein sequence | MNAPLALNQL LDAEAGSPRL REIPYNYTSF SDREIVIRLL GEESWRVLNE LRGVRRTGRS
ARMLFEILGD IWVVQRNPFL QDDLLDNANR RQQLIDALWH RLGEVKKRNV GDSAEQVEVL
LSAAYRAVEN FQNGFKEVEQ IRKRARKELG RHTASDNICF DGISRAAHVT DATDWRVEFP
LVVLKPDYES EIPGLVKACV ELGLTIIPRG GGTGYTGGAI PLYAMSAVIN TEKLQDIGGV
KSKRLPGMDR EVSTIFTGAG VVTRRVSDAA EHAGLVFAVD PTSADASCIG GNIAMNAGGK
KAVLWGTALD NLASWRMVDP EGNWLDIERL EHNMGKIHDV ATVRFQLTWS DGNSEPGERI
LKTELLEVEG KRFRKEGLGK DVTDKFLSGL PGVQKEGCDG LITSATWVLH RMPKYMRTVC
LEFFGQAREA IPSIVEIKAY LDGLSKQGGP ILAGLEHLDD RYLRAVGYST KSKRNSLPKM
VLIGDIAGDD EEAVAAATSE VVRMANLRVG EGFVAVSAEA RKKFWLDRAR TAAIARHTNA
FKINEDVVIP LPRMGEYTDG IDLINIELSL KNKLQVLDAL ESFLTKSALP LGKSDEDYEI
PTAEILGDRV QQALELIATV RARWAEWLMQ MDTYFPQLQN YSLRASWKEE VRSELRIIFG
GLVFEPILNE LEAIHKNILR KRVFVALHMH AGDGNVHTNI PVNSDDYEML QDAHRAVDRI
MKLARSLDGV ISGEHGIGIT KLEYLTEAEL KDFRSYKNRV DPEGRFNKGK LMPNADLSMA
YTPSFGLMGH ESIIMQQSDI GAIADSVKDC LRCGKCKPVC STHVPRANLL YSPRDKILAT
SLLIEAFLYE EQTRRGVSIR HWEMFDDVAA HCTVCHKCLT PCPVNIDFGE VTMNMRNLLR
KMGQQRFNPG TAASMFFLNA TSPESINLAR KTMIGWGYKL QRLGNDVLRK FAKKQTAHPP
ATVGKPTVTE QVIFFVNKKM PGNLPKKTAR ALLDIEDANY VPIIRDPKTT SSDTEAVFYF
PGCGSERLFS QVGLATQAML WNVGVQTVLP PGYLCCGYPQ RGNGDFDKAE KMITDNRVLF
HRVANTLNYL DIKTVVVSCG TCYDQLAGYQ FEQIFPGCRI IDIHEFLAEK GVKLSGVTGV
KYMYHDPCHS PMKLQDPLKT VNELIQLEDG KAIQKNDRCC GESGTLAVTR PDISTQVRFR
KQIEMEKGAN DLRKGDFTGD VKVLTSCPSC LQGLTRFDAD SDTTADYIVV EMAQKLLGEN
WMQEYVAKAN QGGIERVLV
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