| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1890 |
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| Symbol | |
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| ID | 5054016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1965094 |
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| End bp | 1966917 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640472064 |
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| Product | ABC transporter related |
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| Protein accession | YP_001156666 |
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| Protein GI | 145590069 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000124056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACATT CATCGGGACA TCACCACAGA AGTACTGATT CAAAAACACC TCAACGAGGT
GATTGGCGGG TTATTCGCGA TCTTCTGCCA TACCTTTTGG AGTACCGCTT TAGAGTCATT
ATTGCGCTGA GCTGTTTGAT TGCCGCTAAG GTTGTCAATC TCGGCATTCC GATTGTGATG
AAAGAGTTGA TTGACGCTTT GGATATCAAA GCAAGCTCAC CACAAGCCCT TCTAGTCGTG
CCTCTGGGCA TTATTTTTGC CTATGGCTTA TTAAGAATTT CTGCATCCCT CTTTACGGAG
TTGCGTGAGG CCTTATTTGC CAAGGTTACC CAAAATGCAG TTCGTAAGGT AGCGCTTCAA
GTTTTTGAAC ACTTGCATTC CTTAGCTCTA AGTTTTCATC TTGCGCGGCA GACGGGTGGT
GTCAGTAGAG ATATTGAGCG CGGAACACGT GGTATTCAGT CGCTGATCTC GTACTCGCTG
TATAGCATCT TGCCCACCTT GATTGAGTTT TGTTTAGTAC TAGGCTACTT CGCCTACTCC
TATGACATTT GGTTTGCTGC AATTACTTTG GCAGCCTTGG TTCTATATAT TGCTTTTACG
ATCGTGGTTA CTGAATGGCG AACTCATTAC CGTCGTACGA TGAACGATAT GGATTCAAAG
GCGAATCAGA AAGCCATTGA CTCCCTATTG AACTTTGAGA CAGTAAAGTA TTTTGGCAAT
GAGGCATTTG AAGCGGGACG TTACGATGAG AACTTATTGC GTTATCAAGC CGCAGCAGTC
AAGTCGCAAA AGACCTTAGC GTTTTTGAAT CTTGGACAGC AAATCATTAT TGCGACTGGT
TTAATGCTGA TCCTGTGGCG CGCTACGGTA GGGGTAGTTA ATGGAACAAT GACCTTGGGC
GACTTAGTTT TAGTGAATAC CTTGATGATT CAGCTTTACA TACCGCTCAA TTTCTTGGGA
GTGATTTATC GAGAAATTAA ACAGTCATTG ACTGACATGG ATCGTATGTT CTCTTTATTA
AATACCGATA AAGAAATTGC TGACTCTCCT GATGCAAAGT CACTCCAAAT TCAAAATCGC
GGCCATGGCC CAGATGTGCG GTTTGAGCAT GTGTCATTTC ACTACGAAGC TAAGCGTGAA
ATTCTTCGCG ATATTAGTTT CAATATTCCG GCTGGCACCA TTACTGCGGT TGTCGGTCAA
AGCGGTGCTG GTAAAAGCAC GCTGGCAAGA TTGCTGTTTC GTTTTTATGA TGTGCAGTCA
GGAGAAATTC TGATTGACGG TCAAAATATC CAAGACGTCA CTCAAGCTAG CTTGCGCAAA
GCAATTGGCA TCGTTCCGCA AGATACAGTT TTATTTAATG ACACGATTGG CTATAACATC
GCCTATGGTG ATCCTTCAGC CACGATTGAA GAGGTACAAG AGGCGGCGAG AGCAGCTCAA
ATTGACGGCT TTATTAAGCG CTTACCAGAT GGATACGACA CACAGGTAGG TGAGAGGGGC
TTGAAGCTCT CTGGAGGCGA GAAACAGCGC GTAGCCATTG CTAGAACACT GCTTAAAAAG
CCAGCAATGT TGATATTTGA TGAGGCTACT TCCGCTCTAG ATTCCAAAAC AGAGCGCGCT
TTTCAGGAAG AGTTACTCAG TTTGGCCAAA AATCGGACCA CACTCATCAT TGCCCATCGC
CTTTCAACAA TTATTCATGC CGACCAAATT TTGGTCATGG AACATGGGCA GATTGTCGAG
AGAGGAACCC ACATGGAGCT TCTTGCCGCT CAAGGTAGGT ACGCCGAGAT GTGGCAAATG
CAAGAACGCG CTACTCTTGA TTAG
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| Protein sequence | MRHSSGHHHR STDSKTPQRG DWRVIRDLLP YLLEYRFRVI IALSCLIAAK VVNLGIPIVM
KELIDALDIK ASSPQALLVV PLGIIFAYGL LRISASLFTE LREALFAKVT QNAVRKVALQ
VFEHLHSLAL SFHLARQTGG VSRDIERGTR GIQSLISYSL YSILPTLIEF CLVLGYFAYS
YDIWFAAITL AALVLYIAFT IVVTEWRTHY RRTMNDMDSK ANQKAIDSLL NFETVKYFGN
EAFEAGRYDE NLLRYQAAAV KSQKTLAFLN LGQQIIIATG LMLILWRATV GVVNGTMTLG
DLVLVNTLMI QLYIPLNFLG VIYREIKQSL TDMDRMFSLL NTDKEIADSP DAKSLQIQNR
GHGPDVRFEH VSFHYEAKRE ILRDISFNIP AGTITAVVGQ SGAGKSTLAR LLFRFYDVQS
GEILIDGQNI QDVTQASLRK AIGIVPQDTV LFNDTIGYNI AYGDPSATIE EVQEAARAAQ
IDGFIKRLPD GYDTQVGERG LKLSGGEKQR VAIARTLLKK PAMLIFDEAT SALDSKTERA
FQEELLSLAK NRTTLIIAHR LSTIIHADQI LVMEHGQIVE RGTHMELLAA QGRYAEMWQM
QERATLD
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