| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1880 |
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| Symbol | ruvB |
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| ID | 5052150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1955487 |
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| End bp | 1956557 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640472053 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001156656 |
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| Protein GI | 145590059 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00242586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC ATACAGACGA CCTCAGCTCT ATTCCAGAAG ATTTACCGGA AGGTAATGAC
CGCATCGTCA GCGGGGCAGC TGGTAATACC GAGGCTGTTT TTGAAAGAGC CCTTCGCCCG
AAACAACTCG ATGAGTATGT TGGTCAAACC AAAGCACGCG CCCAATTAGA AATTTTCATC
AGCGCCACAA GAGCACGTCA AGAAGCTTTG GATCATGTTC TTTTGTTTGG ACCTCCAGGT
CTTGGTAAGA CAACCCTTGC TCATATTATT GCTAGAGAGC TAGGTGTTAA TCTGCGTCAA
ACAAGTGGTC CTGTCCTTGA TAGACCGGGC GACCTGGCCG CCTTACTTAC AAACCTAGAG
ACCAATGATG TTCTGTTTAT CGATGAAATT CATCGCCTCT CTCCAGTTGT AGAAGAGATT
CTCTACCCTG CACTAGAGGA CTACAGTCTG GACATCATGA TTGGTGAAGG CCCTGCTGCA
CGTAGCGTGA AGATTGATCT TAAGCCCTTT ACTTTAATCG GCGCCACAAC ACGCGCTGGC
ATGCTCACTA ATCCATTGCG TGATCGCTTT GGTATTGTCG CGCGACTTGA GTTCTATACA
ACAGAAGAGC TCACCAAAAT TATTACTCGT TCAGCCAGCT TATTAAAAGC AAGCATTGAT
CCAGAAGGAT CGATAGAGAT TGCTAAGCGT GCGCGTGGCA CCCCTCGAAT TGCAAACCGC
CTGTTACGTC GTGTGCGTGA CTATGCAGAA GTAAAGGGTA CTGGCACTAT TACCAAAGCC
ATGGCTGATG CTGCCCTAAA AATGCTCGAT GTAGACCCAA GCGGTTTTGA TGTCATGGAT
AGAAAATTAC TTGAAGCTAT CTTGCACAAG TTTGATGGTG GTCCAGTTGG CATCGATAAT
CTCGCTGCAG CAATTGGCGA GGAGCGCGAT ACCATTGAAG ATGTTCTAGA GCCCTACCTC
ATTCAGCAAG GCTATCTACA GCGAACCTCA CGCGGCCGAG TAGCGACCCG TCAGGCATAT
GAGCACTTTG GCTTAACGCC ACCTAGCGGA GTTGGCAGCC TAGAAATCTA A
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| Protein sequence | MAIHTDDLSS IPEDLPEGND RIVSGAAGNT EAVFERALRP KQLDEYVGQT KARAQLEIFI
SATRARQEAL DHVLLFGPPG LGKTTLAHII ARELGVNLRQ TSGPVLDRPG DLAALLTNLE
TNDVLFIDEI HRLSPVVEEI LYPALEDYSL DIMIGEGPAA RSVKIDLKPF TLIGATTRAG
MLTNPLRDRF GIVARLEFYT TEELTKIITR SASLLKASID PEGSIEIAKR ARGTPRIANR
LLRRVRDYAE VKGTGTITKA MADAALKMLD VDPSGFDVMD RKLLEAILHK FDGGPVGIDN
LAAAIGEERD TIEDVLEPYL IQQGYLQRTS RGRVATRQAY EHFGLTPPSG VGSLEI
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