Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1823 |
Symbol | |
ID | 5052669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1902179 |
End bp | 1903867 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471996 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001156600 |
Protein GI | 145590003 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTAG ATAAAAAACC CTCCTTTTTG TGGCGTTTAG TCACTGCCCA ACTAATATTG ACCCTGACTT GCTCAGGTCT TTCCCCTACT TATGCAGCCT CAGTAACAGG CGATGTTTCT GTTGAGGGAA ATTCAGCAGC TATACAGAAT ATTGGCCGTG CTATGCAGTC TCCAGACGCG CGACCCACTA ATGCGCCAAC TAGAACTACC TATACTCAGT CTAATATTGT GTTGCCAGAT ATGGGTGATC CCGGCGGAGA TTCATTAAGT CGCATAGATG AGCGTAAGTA TGGTGAGTTA ATCATGCGTC AAATTAGGCC GGATCCTGAT TATTCAAATG ATTTACCGAT CTATGATTAC CTTAATCAAA TGGAGCGACG TTTATTACAG GCTGCAAAGA AAGCTCAGCT GGGTGGTGCT AATGAGCAGG GTAGTGGTGC CTACAATTTT GAATTATTTG CGGTAAAAGA TAGCAGCATT AATGCATTCG CATTGCCGGG TGGATTCATT GGTTTTCATA CAGGCTTGAT TGTCAATGCA GAATCAGACT CTGAAGTAGC TTCCGTAATG GGTCATGAAA CTGGCCACGT ATTGCAGCGT CATTTAGCCA GGCAAATGGA TAAGCAAGCT ACCAACACAA TGATTGCTTT AGCTGGAGTA CTGCTTGGTG CATTAGCTGC ATCACGCAAT CCTCAGGCCG CGGCTGGCCT TATGCAGGGC GGACAAGCGG TCGCCATTAA TAACCAGCTG TCATATTCTA GAGATGCTGA GCGTGAGGCG GATCGTATTG GTTTTCAGAT CTTGGATGCC AGTGGTTATG ACGTTAATGG CGCCCCAGGA TTTTTTCAGC GCTTACAAAA GGCCACTGGA ATTATGGACA AGGGAGTACC ATCGTATGTT CGTACTCACC CTTTAACAAT TGACCGTATT GCGGATATGC AAGATCGTGC ACGTACTGTG CCTCCGCGCA ATGTACCCAC ATCAGCTGAG TTTTACTTTA TTAAGGCTCG GGCTCGTATG GAACAAGCGG GAACCTCTAG TGGGCTCTAC GACTTAAAAA ATACTTTTGA CAGTTTAAGC AAGCAGCCAC AAGCTGGAAA ACAAATGGAA GGCTTTTATG GTTTGGCCCT AATTGCTCAA AGACAGGGCA AGTGGGATCA GGCAGAGGCT GATTTGCAAC AAGCACGTAA TTTAGCGCAA AAATCGAGCG CCCCAGGATC GCCTATTCAG CGCCAAAGCC TTTCTTTGGA TATCACCGCT TCAGAGTTGG CGCTAGCTAG GGGTAAAAAT GAAGAGGCAC TACAAATTGC GCAGACTGCT TTACGTGCAT ACCCTCAGTC TTATGCGGCT GGCGCAGCCA TGATTAATGC TGAATTAAAG TTGGGCAGAA CGAACGATGC TATTGCTTGG TTAAAGGCGC GTACAAAATC ACAGCCTAAT GAGATTGTTT GGTGGGGAAT GCTGTCCAAT GCTTATGAGA AGGCTAACAA TATCCCTATG CGTCACTACG CTCTGGGAGA AAAATATGCG CTTGAAGGTG CATGGCCATC TGCCATTGAG CAATTGAGGA TTGCCCGTGC GGCTGGTGGC TCAGATTTTT ATCAGGGTTC TAGTATTGAT GCTCGTTTGC GCGAAATGCA ACGTCAGTAT CAAGACGAGC TCAAAGAAAA CAAACAATTA CCTAGTTAG
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Protein sequence | MKLDKKPSFL WRLVTAQLIL TLTCSGLSPT YAASVTGDVS VEGNSAAIQN IGRAMQSPDA RPTNAPTRTT YTQSNIVLPD MGDPGGDSLS RIDERKYGEL IMRQIRPDPD YSNDLPIYDY LNQMERRLLQ AAKKAQLGGA NEQGSGAYNF ELFAVKDSSI NAFALPGGFI GFHTGLIVNA ESDSEVASVM GHETGHVLQR HLARQMDKQA TNTMIALAGV LLGALAASRN PQAAAGLMQG GQAVAINNQL SYSRDAEREA DRIGFQILDA SGYDVNGAPG FFQRLQKATG IMDKGVPSYV RTHPLTIDRI ADMQDRARTV PPRNVPTSAE FYFIKARARM EQAGTSSGLY DLKNTFDSLS KQPQAGKQME GFYGLALIAQ RQGKWDQAEA DLQQARNLAQ KSSAPGSPIQ RQSLSLDITA SELALARGKN EEALQIAQTA LRAYPQSYAA GAAMINAELK LGRTNDAIAW LKARTKSQPN EIVWWGMLSN AYEKANNIPM RHYALGEKYA LEGAWPSAIE QLRIARAAGG SDFYQGSSID ARLREMQRQY QDELKENKQL PS
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