| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1808 |
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| Symbol | |
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| ID | 5052079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1886621 |
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| End bp | 1887244 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640471981 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001156585 |
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| Protein GI | 145589988 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000516369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAC GCGTGATGTT GGTAGATGAC CATCCAGCAA TGCTGATGGC ACTCAAAAGT
ATGTTGCAAG ACCAGTTGTT ATTTGAAATA GCGGGGCAAG CCCAGAACGG CGAAGAATGC
CTTAGATCCA TCAAAGAAGT AAATCCAAAT ATGGTCATTT TAGATTTAGA TATGCCCAAG
ACTGATGGGT TTGATGTTAT TCGTCGCATT GGATTGATGT ATCCAGATAT TCGCATGCTT
GTTTTATCCA GCTTAGATGA GGCCGTCTAT GGCGGAAGAG TTCGTTCACT AGGCGCCCAT
GGCTTCGTAA ATAAAACTGC CGGGGCTGAC GTTATCTTGG CAGCCTGCGT AGCCATTTCT
CAAGGTTATA ACTTTTTTAC CCATGGCAAA AATGGCAACA GCTCGCTAAC AGATAACGAT
AAGCTAGCCT TAATCTCAGA CCGAGAGCTA CAAGTCATGA AATATCTTGG CAAAGGCAAT
ACCAATCAGC AAATTTCAGA TCTGTTGCAT ATCAGCAATA AAACGGTTGC TACATATAAA
ACAAGGGTCT TTGACAAGCT TGGCATTAAT AATATTGCTG ATTTAATTCT GTTCTGCAGA
ATAAATAACA TTATCGAAAG TTAA
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| Protein sequence | MRKRVMLVDD HPAMLMALKS MLQDQLLFEI AGQAQNGEEC LRSIKEVNPN MVILDLDMPK
TDGFDVIRRI GLMYPDIRML VLSSLDEAVY GGRVRSLGAH GFVNKTAGAD VILAACVAIS
QGYNFFTHGK NGNSSLTDND KLALISDREL QVMKYLGKGN TNQQISDLLH ISNKTVATYK
TRVFDKLGIN NIADLILFCR INNIIES
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