Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1774 |
Symbol | |
ID | 5053612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1844473 |
End bp | 1846143 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640471947 |
Product | DNA repair protein RecN |
Protein accession | YP_001156551 |
Protein GI | 145589954 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCAAA CCATCTCACT TCGTGATTTC GTCATTGTTG ACCAACTTGA GCTAGATTTT TCCAGCGGCT TTACCGTGCT TACTGGCGAA ACTGGTGCTG GAAAGTCTAT TCTGCTTGAC GCTCTTAGTC TCGTATTGGG AGAACGTGCT GATAGTAGCC AGATTCGTGA AGGCAGTACT CGCGCAGAAA TATCAGCCCT GTTTCAGATT AACCCCGAAC AGCTCAGCCA CTTTAGCCAA TGGCTCGATG AGCAAGGCTT CCCAGTTGAA GATGGCGGAC AAAGCCTGCT GCTTAAGAGA ACCGTTGAAA GTAATGGTCG AAGTCGTGCG TTCATTAATG GTAGCGTTGC GACCTTGGCT CAACTGCGTG AGGCAGGCGA TCAGCTAGTT GATATACATG GGCAGCATGC CCATCAACTA CTCCTCAAAG GAGGCGCGCA ACGTGAATTA CTCGATCGTC ATGCAGGACT TCTACCTTTG GCTTCCGAGG TAGCCCAGGC CTTCAAAACC CTGAATGACT CCCGTCGGCG CTTAACGCAA GCAGAAAATG CCGGTCAAGA TATTGAGCGC GAACGTGAGC GCCTAGAATG GCAACTTGAA GAACTCAATG CTTTAGCACC ACAAAGTGGT GAATGGGCAA CCATCCAAAG CGAACATGAT CGCCTAGCTA ATGGCGCCAA ATTGATTGGG GGCTGCCAGG AAGCCATCGA AATCTTGAGT GATGCCGATA ACTCATTGGA ATCAACTCTA TCGAAGGTTT GCGGCAATAT TGGCGCATTG GCGGCGCATG ATCCAGCCTT AGCTGATATT AGCGAATCAT TGGAGAGCGC ACAAATTCAA TTGGATGAAG CTATTCATGG GTTAAATCGC TATTTACAAA AAATTGATTT AGATCCCGCG CGCCTCGAGC AAGTAGAGGA ACGCATGCAA GCTTTATATG GCGCTGCTAA AAAATATCGT TCAGAAGTAG ATCACTTACC TACCTTGCTA TCTGACACAG CAGAGCGTTT AGAGGCTTTG ACAGCCTCAC AAAATATTGA AACCCTGCGC GAAAAAGTCA AACAAGAAGA GGTGGCTTAT TTAAAGCTAG GCAAGCAGCT CTCTCAAAAA CGAAGTCAAG CTGCAAAAGA ATTAGGGGGA TTAGTTACCG ATGCGATGCA GAATCTCTCC ATGGCAGGCG GACGACTTGA GATTGCCCTG ACTCCACTGG CGGAAGGTGG CTCTTTTGGT TTAGAACAAA TCGAATTTTT GGTAGCCGGT CATATTGGTA GCACCCCACG CCCTTTAGCA AAGGTAGCAT CAGGCGGCGA ATTAGCGCGC ATTAGCCTGG CAATTAGCGT GATTACCAGC AAAGCCTCAT TTACCCCCAC CTTAATATTT GATGAAGTAG ATGCTGGTAT TGGTGGCGCT GTGGCCGAGA CGGTTGGCAA ACTACTAAAC CAATTGGGTC GATCCCATCA AATTCTTTGT GTCACCCATT TACCTCAAGT GGCTGCTCAA GGTAATCACC ATTTAAAAGT AAGCAAGTCC CAAAATGGTG ATAAAACTAT TTCTCAAGTT CAAGCCCTGG GCAGGGTTGA GCGAGTGGAA GAAGTTGCTC GCATGCTTGG TGGGGCCACC ATCACCGATA CCACTAGACG TCACGCTCGA GAACTACTAG AACAAGATTA G
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Protein sequence | MLQTISLRDF VIVDQLELDF SSGFTVLTGE TGAGKSILLD ALSLVLGERA DSSQIREGST RAEISALFQI NPEQLSHFSQ WLDEQGFPVE DGGQSLLLKR TVESNGRSRA FINGSVATLA QLREAGDQLV DIHGQHAHQL LLKGGAQREL LDRHAGLLPL ASEVAQAFKT LNDSRRRLTQ AENAGQDIER ERERLEWQLE ELNALAPQSG EWATIQSEHD RLANGAKLIG GCQEAIEILS DADNSLESTL SKVCGNIGAL AAHDPALADI SESLESAQIQ LDEAIHGLNR YLQKIDLDPA RLEQVEERMQ ALYGAAKKYR SEVDHLPTLL SDTAERLEAL TASQNIETLR EKVKQEEVAY LKLGKQLSQK RSQAAKELGG LVTDAMQNLS MAGGRLEIAL TPLAEGGSFG LEQIEFLVAG HIGSTPRPLA KVASGGELAR ISLAISVITS KASFTPTLIF DEVDAGIGGA VAETVGKLLN QLGRSHQILC VTHLPQVAAQ GNHHLKVSKS QNGDKTISQV QALGRVERVE EVARMLGGAT ITDTTRRHAR ELLEQD
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