| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1715 |
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| Symbol | |
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| ID | 5051943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1782453 |
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| End bp | 1784816 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471888 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001156492 |
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| Protein GI | 145589895 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTCAG ACTTGCTCGC GAACCTCAAT CCAGAACAGC GCGAGGCAGT AACCCTCCCG
CCCGTTAATC CCCATGGCCA AGCCCAATCA GCCCTCATTC TGGCTGGTGC TGGCAGTGGC
AAGACACGTG TCTTGACCAC ACGTATCGCC TGGCTCATCC AAACGGGCCA GGTATCGCCT
ATTGGGGTTC TGGCGGTGAC TTTCACCAAT AAAGCTGCCA AGGAGATGAT GGTGCGTTTA
AGCGCCATGT TGCCCATCAA TACTCGCGGT ATGTGGATTG GGACCTTTCA TGGCCTGTGT
AACCGTTTAT TGCGGGCACA TCATAAAGAA GCGGGTTTGC CATCAACTTT TCAGATTCTG
GACACTCAAG ATCAGCTTTC TGCCATTAAG CGCCTCTTAA AGGGCTTAAA GGTCGATGAT
GAAAAGTATC CGCCAAAACA ATTGCAGTAT TTCATTGCCC ATGCCAAAGA ACGTGGGCAG
CGTGCAAAAG ATTTGGCAGT CGGTGATGAT TTTCAAGCAA AGATGGCCCA ACTATACGGT
GCTTACGATG AGCAATGTCA GCGTGAAGGC GTGGTGGATT TTGCGGAATT GTTATTGCGT
AGTTATGAAC TTTTAAAGCA CAGCGAGCCT ATTCGTACCC ATTACCAAGA GCGTTTTCGC
CACATCTTGA TTGACGAGTT TCAAGATACG AATGCCTTGC AATACGCTTG GTTGAAATTG
TTATCAGGTC ATGACGCTAG CCGAGTCAAT GTGAGTGGCA TGGGCACTAG CGCAGTCTTC
GCAGTCGGTG ACGATGACCA AAGTATCTAT GCATTCCGTG GCGCAGATGT TGAGAACATG
CGCCTCTATG AAAAACAGTT TCATCCGCTC TTGGTAAAGT TAGAGCAGAA CTATCGCTCG
CATGGCCACA TTCTGGATAC AGCTAATCAT TTGATTGCAA ATAACTCTGA GCGTTTAGGA
AAAAATCTCC GAACTGATGC TGGTCATGGC GAGCCAGTGC GAATTTATGA TGCACCAAGC
GATCACGCCG AAGCAGCCTG GCTGGTAGAG GAAATCAAAG CTTTAGTAAA TAGCGGTATT
AAGCGTACTG AAATTGCATT GCTTTATCGA AGCAATGCAC AGTCACGCAT CATTGAGCAT
AACTTATTTT CTGCTGCGAT TCCGTATCGG GTTTATGGCG GCTTGCGCTT CTTTGAGCGT
GCTGAGATTA AGCATGCGCT AGCGTATTTG CGCCTACTTG AAAACCCAAA TGATGACACC
TCATTCTCTC GGGTCGTTAA TTTTCCAACG CGTGGTATTG GCGCCAGATC TATCGAAGCA
TTACAAGATG CAGCTAGAGC GCAGCAATGC TCTTTGTATT CAGCAGCCTC TTCTCTTGAG
GGAAAAGCAG GCGCTACCTT AGGTGGATTT ATTCGCTTGG TAGACCACAT GCGTGAAGCA
ACTCGCCACA ATACCTTGCC AGAAACGGTC GAGTTTGTAA TTCAGCACAG CGGTTTAATT
CAGCATTACC TTTCAGAGCG CGAAGGTCAA GATCGCGTAG AAAACTTGCA AGAATTAATT
AATGCTGCCA CCGCCTTTAT TGCTGAAGAG GGATATGGTC AAGATGCTGC CGCAGCTATG
CTTCCGGGAG AAAATGCACC TGGTGTCGTA GAAGTCTCAC CGCTTGCAGC CTTTTTATCC
CATGCTTCTC TAGAGGCAGG GGACAACCAG GCCCAGGCTG GGCAAGATGC CGTGCAATTG
ATGACGGTCC ACTCGGCTAA AGGCTTGGAA TTCACGGCTG TCTTTATTAC CGGCCTTGAG
GAGGGTTTGT TTCCTCATGA AAACAGCATT AATGAACAAG ATGGCCTAGA AGAAGAACGA
CGCCTCATGT ATGTAGCAAT AACACGTGCC AAAGAGCGCT TGTATTTGTC ACACACTCAA
TCTCGGATGT TGCATGGGCA AGTGCGTTAC AACATGCCAT CTCGTTTCTT GGAAGAATTG
CCATCAGACT CATTGAAGTG GCTGACACCC AAAGCAAAAG ACGCACGTTG GGGTGGAAAC
TCTAGATCGG GTTCAACTTG GCAAGATGGC TATACGCGTC AACGGGAATA CGAGTCCAAT
GATTTCTTTG ATTCAGGAAG TGAGCGTCAA AGACCAGTAA AGCGTGTTGG CTCAGCCTCT
ATGGAGGTGA AGCGTTTAGC ATCGCCCCCG CGCGGTGATT ACCCGTTCAA AATTGGTCAG
AATGTTTTCC ATACCAAGTT TGGTGAAGGT CGTGTAACTG GTTTAGAGGG TGTTGATACC
GATGCGCGTG CACAAGTAAA TTTCAAGCGT CACGGCATTA AATGGTTGCA GTTGAGTATT
GCTAAGCTTG CGGCGATCGA CTAA
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| Protein sequence | MYSDLLANLN PEQREAVTLP PVNPHGQAQS ALILAGAGSG KTRVLTTRIA WLIQTGQVSP
IGVLAVTFTN KAAKEMMVRL SAMLPINTRG MWIGTFHGLC NRLLRAHHKE AGLPSTFQIL
DTQDQLSAIK RLLKGLKVDD EKYPPKQLQY FIAHAKERGQ RAKDLAVGDD FQAKMAQLYG
AYDEQCQREG VVDFAELLLR SYELLKHSEP IRTHYQERFR HILIDEFQDT NALQYAWLKL
LSGHDASRVN VSGMGTSAVF AVGDDDQSIY AFRGADVENM RLYEKQFHPL LVKLEQNYRS
HGHILDTANH LIANNSERLG KNLRTDAGHG EPVRIYDAPS DHAEAAWLVE EIKALVNSGI
KRTEIALLYR SNAQSRIIEH NLFSAAIPYR VYGGLRFFER AEIKHALAYL RLLENPNDDT
SFSRVVNFPT RGIGARSIEA LQDAARAQQC SLYSAASSLE GKAGATLGGF IRLVDHMREA
TRHNTLPETV EFVIQHSGLI QHYLSEREGQ DRVENLQELI NAATAFIAEE GYGQDAAAAM
LPGENAPGVV EVSPLAAFLS HASLEAGDNQ AQAGQDAVQL MTVHSAKGLE FTAVFITGLE
EGLFPHENSI NEQDGLEEER RLMYVAITRA KERLYLSHTQ SRMLHGQVRY NMPSRFLEEL
PSDSLKWLTP KAKDARWGGN SRSGSTWQDG YTRQREYESN DFFDSGSERQ RPVKRVGSAS
MEVKRLASPP RGDYPFKIGQ NVFHTKFGEG RVTGLEGVDT DARAQVNFKR HGIKWLQLSI
AKLAAID
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