Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1670 |
Symbol | |
ID | 5051960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1735229 |
End bp | 1737019 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471843 |
Product | potassium-transporting ATPase subunit A |
Protein accession | YP_001156447 |
Protein GI | 145589850 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2060] K+-transporting ATPase, A chain |
TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.646576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCC ATGCCATTTT GACAATCGTT CTTTATGTTG GGGTCTTGCT ACTATTAGCT TATCCCCTAG GAGGTTTCAT TGATGCCGTG ATGAGCGGTC AATCGATTAC TTCCAAAAAA CCATTTAGAT TCATAGAAAA TTTTATTTAC AAAGTATGCG GCATTGATCC AGCTATTGAA ATGAGCTGGT TAAGCTATGC AATTGGATTA ATTGCCTTTA ACATCCTTGG GGTTTTATTT GTCTTTGGTT TACAGTTATT TCAGGGCATT CTTCCGCTAA ACCCTCAGGG TTTAGTAAGC GTTTCTCCAG ACTCCTCCTT CAATACTGCA ATTAGTTTTG CCACGAATAC CAATTGGCAG GCCTACGTAG GTGAGGGAAC AATGAGCTAT CTCACGCAAA TGTTGGGACT TACAACACAA AACTTCCTTT CTGCTGCAAG CGGCATCGTT GTTGTGATTG CGCTTATTCG TGGCTTTGCT AGAAACAGTA TTAAGACCAT TGGCAATCTT TGGGTGGATT TAACCCGTAT TACCTTATAC GTGCTGGTCC CTATTTCGGT TGTATACGCA ATCTTTCTAG TTGGTCAGGG CTCCATTCAG AACTTTGATG CATACAAAGA TGTCAAAACA GTTGAGGTTG CTAAGTTTGA TGCGCCTAAG CTTGATGCCG ATGGTCAGCC ACTAAAGGAT GAAAAGGGTG CAGTTTTAAC TGGGCCAGCC TCAACAGATC AGCAAACTTT GCCAATGGGC CCAGTGGCCT CCCAAGAAGC AATTAAGATG TTGGGCACCA ATGGTGGGGG TTTCTTTAAT GCGAATTCTG CACATCCATA CGAAAACCCA ACGCCCTTAT CTAATTTCAT TCAGATTCTT TCTATCTTTT TGATTCCAGC TGCATTATGT TTTACCTTTG GTCGCATGGT TAGGGATAAG CGACAAGGTT GGGTAGTACT GGTGACGATG ATCTTGATTT TCTTAACAGT AACCTTTGCA GCCGTTCATT TCGAGTCTCA AGCTAATCCA GTCCTTACTA ATCTGGGCGT AGACGGGGCC ATGGGAAATA TGGAAGGCAA GGAAACTCGC TTTGGAATTG ATGATTCTAG TATTTTTGCA AGTATCACCA CGCTCGCTTC ATGCGGTGCA GTCAATTCAA TGCATGACTC CTTTATGCCA ATGGGCGGCT TTGTTCCACT TTGGAACATG ATGCTTGGTG AGGTTGTGTT TGGTGGTGTA GGAACGGGTC TATATGGAAT GCTTGTCTTT GCGATTCTTG CTGTATTTAT CGCTGGGTTA ATGATCGGTC GTACGCCCGA ATACCTTGGT AAAAAGATTG AATCCTACGA AATGAAGATG GTTGCAATTG CAATCTTGGT AACTCCTATT TTGGCGTTGG TGGGAACCGC AATTGCAGTG ATGAGTGTTG ATGGAGTTGC AGGTATTGCT AATCCTGGCG CGCATGGTTT TTCTGAGATT TTGTATGCCT TTACCTCGGC AGCTAATAAC AATGGAAGTG CTTTTGCAGG ACTCTCAGCA AATACACCTT TCTATAACAG CATGCTAGCA ATTGCGATGT GGTTTGGTCG TTTTGGAGTC ATTGTTCCGG TTCTCGCATT GGCTGGTGCA TTTGCAGCCA AAAAGAAGAT AGCGGTAAAT GAGGGAACCA TGCCAACGCA CGGACCACTC TTTATTGTCC TGTTGGCCGG TACAGTGATC TTGGTTGGAG CCTTGAATTA CGTGCCAGCC CTTGCTCTTG GTCCCATTGT TGAGCAGTTA ATGCTCCCAG TGATTCATTA A
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Protein sequence | MSTHAILTIV LYVGVLLLLA YPLGGFIDAV MSGQSITSKK PFRFIENFIY KVCGIDPAIE MSWLSYAIGL IAFNILGVLF VFGLQLFQGI LPLNPQGLVS VSPDSSFNTA ISFATNTNWQ AYVGEGTMSY LTQMLGLTTQ NFLSAASGIV VVIALIRGFA RNSIKTIGNL WVDLTRITLY VLVPISVVYA IFLVGQGSIQ NFDAYKDVKT VEVAKFDAPK LDADGQPLKD EKGAVLTGPA STDQQTLPMG PVASQEAIKM LGTNGGGFFN ANSAHPYENP TPLSNFIQIL SIFLIPAALC FTFGRMVRDK RQGWVVLVTM ILIFLTVTFA AVHFESQANP VLTNLGVDGA MGNMEGKETR FGIDDSSIFA SITTLASCGA VNSMHDSFMP MGGFVPLWNM MLGEVVFGGV GTGLYGMLVF AILAVFIAGL MIGRTPEYLG KKIESYEMKM VAIAILVTPI LALVGTAIAV MSVDGVAGIA NPGAHGFSEI LYAFTSAANN NGSAFAGLSA NTPFYNSMLA IAMWFGRFGV IVPVLALAGA FAAKKKIAVN EGTMPTHGPL FIVLLAGTVI LVGALNYVPA LALGPIVEQL MLPVIH
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