Gene Pnuc_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1670 
Symbol 
ID5051960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1735229 
End bp1737019 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content44% 
IMG OID640471843 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_001156447 
Protein GI145589850 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.646576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCC ATGCCATTTT GACAATCGTT CTTTATGTTG GGGTCTTGCT ACTATTAGCT 
TATCCCCTAG GAGGTTTCAT TGATGCCGTG ATGAGCGGTC AATCGATTAC TTCCAAAAAA
CCATTTAGAT TCATAGAAAA TTTTATTTAC AAAGTATGCG GCATTGATCC AGCTATTGAA
ATGAGCTGGT TAAGCTATGC AATTGGATTA ATTGCCTTTA ACATCCTTGG GGTTTTATTT
GTCTTTGGTT TACAGTTATT TCAGGGCATT CTTCCGCTAA ACCCTCAGGG TTTAGTAAGC
GTTTCTCCAG ACTCCTCCTT CAATACTGCA ATTAGTTTTG CCACGAATAC CAATTGGCAG
GCCTACGTAG GTGAGGGAAC AATGAGCTAT CTCACGCAAA TGTTGGGACT TACAACACAA
AACTTCCTTT CTGCTGCAAG CGGCATCGTT GTTGTGATTG CGCTTATTCG TGGCTTTGCT
AGAAACAGTA TTAAGACCAT TGGCAATCTT TGGGTGGATT TAACCCGTAT TACCTTATAC
GTGCTGGTCC CTATTTCGGT TGTATACGCA ATCTTTCTAG TTGGTCAGGG CTCCATTCAG
AACTTTGATG CATACAAAGA TGTCAAAACA GTTGAGGTTG CTAAGTTTGA TGCGCCTAAG
CTTGATGCCG ATGGTCAGCC ACTAAAGGAT GAAAAGGGTG CAGTTTTAAC TGGGCCAGCC
TCAACAGATC AGCAAACTTT GCCAATGGGC CCAGTGGCCT CCCAAGAAGC AATTAAGATG
TTGGGCACCA ATGGTGGGGG TTTCTTTAAT GCGAATTCTG CACATCCATA CGAAAACCCA
ACGCCCTTAT CTAATTTCAT TCAGATTCTT TCTATCTTTT TGATTCCAGC TGCATTATGT
TTTACCTTTG GTCGCATGGT TAGGGATAAG CGACAAGGTT GGGTAGTACT GGTGACGATG
ATCTTGATTT TCTTAACAGT AACCTTTGCA GCCGTTCATT TCGAGTCTCA AGCTAATCCA
GTCCTTACTA ATCTGGGCGT AGACGGGGCC ATGGGAAATA TGGAAGGCAA GGAAACTCGC
TTTGGAATTG ATGATTCTAG TATTTTTGCA AGTATCACCA CGCTCGCTTC ATGCGGTGCA
GTCAATTCAA TGCATGACTC CTTTATGCCA ATGGGCGGCT TTGTTCCACT TTGGAACATG
ATGCTTGGTG AGGTTGTGTT TGGTGGTGTA GGAACGGGTC TATATGGAAT GCTTGTCTTT
GCGATTCTTG CTGTATTTAT CGCTGGGTTA ATGATCGGTC GTACGCCCGA ATACCTTGGT
AAAAAGATTG AATCCTACGA AATGAAGATG GTTGCAATTG CAATCTTGGT AACTCCTATT
TTGGCGTTGG TGGGAACCGC AATTGCAGTG ATGAGTGTTG ATGGAGTTGC AGGTATTGCT
AATCCTGGCG CGCATGGTTT TTCTGAGATT TTGTATGCCT TTACCTCGGC AGCTAATAAC
AATGGAAGTG CTTTTGCAGG ACTCTCAGCA AATACACCTT TCTATAACAG CATGCTAGCA
ATTGCGATGT GGTTTGGTCG TTTTGGAGTC ATTGTTCCGG TTCTCGCATT GGCTGGTGCA
TTTGCAGCCA AAAAGAAGAT AGCGGTAAAT GAGGGAACCA TGCCAACGCA CGGACCACTC
TTTATTGTCC TGTTGGCCGG TACAGTGATC TTGGTTGGAG CCTTGAATTA CGTGCCAGCC
CTTGCTCTTG GTCCCATTGT TGAGCAGTTA ATGCTCCCAG TGATTCATTA A
 
Protein sequence
MSTHAILTIV LYVGVLLLLA YPLGGFIDAV MSGQSITSKK PFRFIENFIY KVCGIDPAIE 
MSWLSYAIGL IAFNILGVLF VFGLQLFQGI LPLNPQGLVS VSPDSSFNTA ISFATNTNWQ
AYVGEGTMSY LTQMLGLTTQ NFLSAASGIV VVIALIRGFA RNSIKTIGNL WVDLTRITLY
VLVPISVVYA IFLVGQGSIQ NFDAYKDVKT VEVAKFDAPK LDADGQPLKD EKGAVLTGPA
STDQQTLPMG PVASQEAIKM LGTNGGGFFN ANSAHPYENP TPLSNFIQIL SIFLIPAALC
FTFGRMVRDK RQGWVVLVTM ILIFLTVTFA AVHFESQANP VLTNLGVDGA MGNMEGKETR
FGIDDSSIFA SITTLASCGA VNSMHDSFMP MGGFVPLWNM MLGEVVFGGV GTGLYGMLVF
AILAVFIAGL MIGRTPEYLG KKIESYEMKM VAIAILVTPI LALVGTAIAV MSVDGVAGIA
NPGAHGFSEI LYAFTSAANN NGSAFAGLSA NTPFYNSMLA IAMWFGRFGV IVPVLALAGA
FAAKKKIAVN EGTMPTHGPL FIVLLAGTVI LVGALNYVPA LALGPIVEQL MLPVIH