Gene Pnuc_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1667 
Symbol 
ID5053798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1729836 
End bp1732529 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content44% 
IMG OID640471840 
Productosmosensitive K+ channel signal transduction histidine kinase 
Protein accessionYP_001156444 
Protein GI145589847 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGT CACGACCAGA TCCCGATCAA TTGCTTGCTC AAATACAGAG CCAAGAGATT 
CAGTCTGGTC GCGGCAAATT AAAGATTTTC TTTGGAGCGA ATGCTGGCGT AGGTAAAACA
TATGCGATGC TATCTGCCGC TCATGAGCAA AGTAAAAATA AGCGAGTGAT TGCTGGTGTC
GTAGAGACAC ACGGTCGAAA AGACACTATA GCAATGCTTG ATGGCATAGA GGTTTTGCCA
CTAAAAGAGA TTGACTATAG GGGCAAGAAA CTCAAGGAAT TTAATCTTGA CCAAGCTCTG
ATTGAAAAGC CTGATTTAAT CCTCATGGAT GAGCTTGCTC ATTCAAATGC AGCTGGCTCG
AGGCATCCGA AGCGCTGGCA GGATGTTGAA GAGCTCTTGG CGGCAGGTAT CGATGTCTAC
TCCACAATCA ATGTGCAACA TATTGAAACT CTGAACGATA TTGTTGGTGG AATTACGGGG
GTTAGGGTTT GGGAAACAGT GCCAGATCAT ATATTCGACT CTGCAGATGA AGTGGTTTTA
GTTGATCTTC CCCCTGATGA GTTATTGCAA AGGCTGAAGG ATGGCAAGGT TTACCTTCCA
CAGCAAGCCG AAAGAGCAAC TCAAAACTTT TTCCGTAAAG GAAATCTAAT TGCGCTACGA
GAATTAGCGC TACGTCGCTC GGCTGATCGT CTAGATGGCG AGATTATTAA ATATCGAAAA
GATAACTCTG TATCCAATGT TTGGAAAACA CGTGAGTCTA TATTGGCTTG TATCGGCCCT
GGAGATGAGG CAGAGAATGT CATTAGAAGT GCTGCAAGAG TTGCCGCACA ACTTCAGATT
CCATGGCATG CAATTTATGT TGAAACTCCC AAATTACAAA ACCTCTCTCA AAAGTCTAGG
GAACGAATTC TGAAAACCAT CTCTATGGCA GAGGAAATGG GGGCAAAAGT AGTGACTGTT
GGTGGAAATG ATGCAGTTGA ATCCATTATT AGTTACGCAA GAGAGCACAA CCTTTCTAGA
GTTATCGTGG GTACTGGTGC CCTTAGTAGA TGGCAAATTT GGAGAAGAGC ATTTTCAGAG
TCAATCTCAA GGCGGGCACC TGATTTAGAC ATTCTCAAAA TTGCTCAAGG TACAAATTCA
ACTAGCATTG CACGCGATAG CTTTGACATT GAATCTTGGA TGTGGCAATT AAAGGCGCCT
TGGCAATCCT ATGCTTTGAG TTTACTAATT TGCGGTATTG CTGGAGTCGT GGCGACTCCC
TTGAATTCGA TAGTAGAGTT GCCGAATATT GCCATGCTAT TTTTGCTGGC AGTCGTTTTA
GTTTCCGTAA AGTATGGCTT GGGCCCATCT TTCATGGCCT CGGCAGTCAA TGTACTAGTG
TTCGACTTCT TTTTTGTGCC ACCGCGTTTT TCATTTTCAG TTTCTGATGC GCAATATGTA
TTCACGTTTG CCGTGATGTT AGTTGTTGGA TTAATTACTG CCAAATTAAC TACGGGTCTT
ACCTATCAAG CTAAGGTCGC CAATAGGCGC GAACAAAGAG TAAAGTCTCT TTATGAGATG
TCTAGAGATT TATCGGGCGC CTTAATGCCA GAACAAGTAG CCGAAATTAG CCAGCATTTT
GTTGAGATTG AATTCAAGGC TAAATCAATC TTGTTATTGG CTGATGATGA TAATCAGCTA
TCAGAAATCA TTATTAATAA AAAATCCAAT CTTCAAGCAG ACTTATCCAT CGCCCAATGG
GCTTTCGATA AATCGAAAGA AGCGGGTAAT GGGACTGATT CATTGCCGGG TGCGCCTTTG
CTATATATAC CTTTGCGAGC ACCAATGCGC ACACGCGGCA TTCTGGTGAT TGATGCCCCA
AGTTCTACGC GTCTCAAATC TCCCGAGCAA CGCAGATTAC TTGATACATT TGCTCGCTTA
CTGGCAATCT CATTAGAGCG TATACATTAT GTATCAGTGG CTCAAAGCTC AACAGTGCAA
ATTGAATCTG AGCGCCTGAG AAACTCACTC TTGTCGGCTA TTTCACACGA TTTGCGAACT
CCACTCACGG CGTTGGTTGG GTTGACTGAT GCGTTAGAGA TGTTGGATGC ACCCCTTACT
TCTGAGCAAA AAGAGATAGC AGTCCTTTTG CGTGAAAAAG CTTTAAAAAT GAGCTCACAA
GTAAGTAATT TATTAGATAT GGCCCGACTT CAGTCTGGTG CAGTTCAATT AAATAAACAA
TGGTTTCTGA TTGAAGAGGC GATTGGCGCC GCCATCAAGT CTGTTGAGTC GGCGAGTGAA
GGTAGGCATA TCACAGTAAC GTTACCTCCG GATTTGCCGC TATTAAATTT TGATGCAGTG
CTGATTGAGC GTGTCTTTAT TAATCTTCTA GAGAATGCTT ATAAATACAC CCCTAAAAAC
AGTAGCGTAT CTATAGGTGC TTCAGTCTCT TCGCCACAGT CTGTCGAGAT TTGGGTTCAA
GATGACGGAC CAGGCCTTCC CAAGGGAAAA GAGGAAGATA TTTTTAGAAA ATTTGAGCGA
GGCAATAAAG AGGGTGCAAT TTCTGGTGTT GGTCTGGGGC TCACTATTTG CAGAGCAATC
ATTGAAGCCC ATGGTGGCAA GATCACCGGA AAGACAATGG CTGGTGGTGG CGCACGGTTT
ACCTTCAGCT TACCTCGGGG TAATCCCCCT AAGATTGATA TCGAAGATCA GTAG
 
Protein sequence
MPESRPDPDQ LLAQIQSQEI QSGRGKLKIF FGANAGVGKT YAMLSAAHEQ SKNKRVIAGV 
VETHGRKDTI AMLDGIEVLP LKEIDYRGKK LKEFNLDQAL IEKPDLILMD ELAHSNAAGS
RHPKRWQDVE ELLAAGIDVY STINVQHIET LNDIVGGITG VRVWETVPDH IFDSADEVVL
VDLPPDELLQ RLKDGKVYLP QQAERATQNF FRKGNLIALR ELALRRSADR LDGEIIKYRK
DNSVSNVWKT RESILACIGP GDEAENVIRS AARVAAQLQI PWHAIYVETP KLQNLSQKSR
ERILKTISMA EEMGAKVVTV GGNDAVESII SYAREHNLSR VIVGTGALSR WQIWRRAFSE
SISRRAPDLD ILKIAQGTNS TSIARDSFDI ESWMWQLKAP WQSYALSLLI CGIAGVVATP
LNSIVELPNI AMLFLLAVVL VSVKYGLGPS FMASAVNVLV FDFFFVPPRF SFSVSDAQYV
FTFAVMLVVG LITAKLTTGL TYQAKVANRR EQRVKSLYEM SRDLSGALMP EQVAEISQHF
VEIEFKAKSI LLLADDDNQL SEIIINKKSN LQADLSIAQW AFDKSKEAGN GTDSLPGAPL
LYIPLRAPMR TRGILVIDAP SSTRLKSPEQ RRLLDTFARL LAISLERIHY VSVAQSSTVQ
IESERLRNSL LSAISHDLRT PLTALVGLTD ALEMLDAPLT SEQKEIAVLL REKALKMSSQ
VSNLLDMARL QSGAVQLNKQ WFLIEEAIGA AIKSVESASE GRHITVTLPP DLPLLNFDAV
LIERVFINLL ENAYKYTPKN SSVSIGASVS SPQSVEIWVQ DDGPGLPKGK EEDIFRKFER
GNKEGAISGV GLGLTICRAI IEAHGGKITG KTMAGGGARF TFSLPRGNPP KIDIEDQ