| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1663 |
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| Symbol | |
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| ID | 5053457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1725400 |
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| End bp | 1726677 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471836 |
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| Product | general substrate transporter |
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| Protein accession | YP_001156440 |
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| Protein GI | 145589843 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTA CAGCTAAGCC CCAATCTAAG TTCTCAACAG TAATCCGCGT TACCAGCGGA
AACTTTATTG AGATGTATGA CTTCTTTTTA TTTGGCTTTT ATGCCACATA TATCTCCAAG
GCATTTTTTC CGTCCGATAG TGAGTACGCA TCTTTAATGC TGACTTTTGC AACATTTGGC
GCTGGATTTT TAATGCGCCC ATTAGGCGCC ATTTTGCTAG GTGGTTATAT TGACCGCATT
GGTCGCCGCA AGGGCCTTGT GCTCACGCTG GGCATTATGG CTACAGGAAC TGCAATGGTT
GCTTTTATTC CAAGCTACGC GACGATTGGC TTGCTAGCCC CTTTATTGGT TTTAGTGGGG
CGCTTGCTTC AAGGTTTCTC GGCCGGGGTA GAGCTGGGCG GTGTATCTGT TTATCTATCA
GAGATGGCAA CGCCTGGACA TAAGGGCTTT TATGTCAGTT GGCAATCTGC CAGCCAACAA
GTGGCTATTA TCTTTTCAGC TGCTTTAGGT TACATCCTCA ATGAATCAAT GAGTAAAGAA
GTGATTGCTG ATTGGGGATG GCGTATTCCA TTTTTCATTG GTTGCATGAT CATCCCTATC
GTTTTTCAGA TTCGTCGCTC ATTACAAGAA ACAGAGGAGT TTCTTGCTAA AAAACATCAC
CCTACTTTTC AAGAAATTAT GAGGGCACTT ACCATCAACT GGCAATTAGT GGTGTCTGGA
ATGATGTTGA TTGTGATGAC AACAGTATCC TTCTATTTAA TCACTGTTTA TACGCCTACA
TTTGGCAAGA GTGTGATGAA GCTCTCTATC GTTGACAGTC TGCTCATTAC TTTATTCGTT
GGTTTATCCA ACTTTATTTG GTTGCCAGTG ATGGGCGCCT TGTCTGACAG AATTGGGCGA
TGGCCGATTA TGGCTTTATT TTCTGGACTT GCTTTATTTA CCGCTTACCC GACTTTAAAT
TGGTTAGTAG AAAATCCAAG CTACGAACAT ATGTTGGCTG TTGAACTTTG GCTATCATTT
TTGTATGGCA GCTATAACGG AGCAACCATT GTTGCCCTTA CTGAAATTAT TCCAATTCAA
ATTCGTACTA CGGGATTCTC ATTGGCTTAT AGCTTGGCCA CAGCTCTTTT CGGTGGCTTC
ACACCATTGG TTTCCACCTG GTTGATTGAG ACAACGGGTG ACAAGGCATC ACCTGGTTAT
TGGATGGCGA TGGCTGGCGG CATGGGTTTA ATTGCCACTG CTTTGATCTA CAAAGGAATA
GTTAAAGCTA AGGTTTGA
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| Protein sequence | MTATAKPQSK FSTVIRVTSG NFIEMYDFFL FGFYATYISK AFFPSDSEYA SLMLTFATFG
AGFLMRPLGA ILLGGYIDRI GRRKGLVLTL GIMATGTAMV AFIPSYATIG LLAPLLVLVG
RLLQGFSAGV ELGGVSVYLS EMATPGHKGF YVSWQSASQQ VAIIFSAALG YILNESMSKE
VIADWGWRIP FFIGCMIIPI VFQIRRSLQE TEEFLAKKHH PTFQEIMRAL TINWQLVVSG
MMLIVMTTVS FYLITVYTPT FGKSVMKLSI VDSLLITLFV GLSNFIWLPV MGALSDRIGR
WPIMALFSGL ALFTAYPTLN WLVENPSYEH MLAVELWLSF LYGSYNGATI VALTEIIPIQ
IRTTGFSLAY SLATALFGGF TPLVSTWLIE TTGDKASPGY WMAMAGGMGL IATALIYKGI
VKAKV
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