Gene Pnuc_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1650 
Symbol 
ID5053828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1714895 
End bp1715539 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID640471822 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_001156427 
Protein GI145589830 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATT CCACCTCTAC CATTCGAAAA ATCCCTTTAT TTCCACTGGG TACCGTACTC 
TTTCCAGATG GCGTGATTGC GCTGAAGATT TTTGAAGCCC GCTATCTCGA CATGATTAAG 
CAATGCTTGC GAGAAAAGAC AGAGTTTGGC GTGGTGAGCA TCATCAAAAA CTCTGACGCC 
AATGAAGAAG ATGTGTCTCT TTCCTTTTCC AAAATTGGCA CACTGGCTCA AATTGAAGAT 
TTCGACCCTA TCCAGCCCGC TCTTTACATG ACCAAATCAT TTGGCACACA GCGCTTCAAG 
CTCATAAATA GCAAACAAGA ACCTAATGGA CTTTGGATGG GTGAAGTTGA ACTTTTAGAA 
AATGATCCAC TTACTCCAAT CCCCGAAGAG CATCAAAAAG TTGCTACGCT ATTAGATGAA 
ATCATCTCAG TCATTCAAAG CGAGGATCTA TTAGGAGAGG CGCCTTTTAA GAAACCATTT 
AAGGTCGATG ATTGTGGCTG GGTTTCCAAC CGTCTTGCCG AACTACTGCC ACTCTCGCTA 
GCGCAAAAGA ATCACTTGCT GGCTCAAACC AATCCCAGGA TCAGGCTCGA TCTCATTACT 
GAAATTATTG AAGATGACGA TTTAAGAAAT GTCATGATGC ATTAA
 
Protein sequence
MTNSTSTIRK IPLFPLGTVL FPDGVIALKI FEARYLDMIK QCLREKTEFG VVSIIKNSDA 
NEEDVSLSFS KIGTLAQIED FDPIQPALYM TKSFGTQRFK LINSKQEPNG LWMGEVELLE 
NDPLTPIPEE HQKVATLLDE IISVIQSEDL LGEAPFKKPF KVDDCGWVSN RLAELLPLSL 
AQKNHLLAQT NPRIRLDLIT EIIEDDDLRN VMMH