| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1600 |
|---|
| Symbol | |
|---|
| ID | 5051999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 1669958 |
|---|
| End bp | 1670824 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640471773 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstA |
|---|
| Protein accession | YP_001156378 |
|---|
| Protein GI | 145589781 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGT CTAATAATTT TGACATGGCT GTATTTGCTC GTCGTAAAAG AGTAAATAAA
ATTGGCCTTG CTCTTTCCAT GTTGGCTATG GCTATCGGTA TGGCTAGCCT TATTTGGATT
TTAAGCATCC TTTTTATTAA AGGATTTTCT GCAATTAATT TGAATATGTT TACTGCGAGC
ACTCCTGCTC CAGGTACTGA AGGCGGTGGT TTAGCCAATG CTATCGTGGG AAGTCTCTTA
TTGGTTGGCT CATGCACTTT TATTAGCACG CCTGTAGGTG TGTTAGCTGG TTTATATCTT
TCTGAGTATG GCGATCGCAG TAAAGTTGCC TCTCTTACCC GCTTTGTAAC TGACATCATG
CTTTCCGCTC CCTCTATTGT GATAGGCCTG TTTGTTTACG CCTTATATGT TGCGAAGGTT
CAGCATTTCT CTGGCTGGGC GGGCACTGTG GCATTGGCTT TAATCGCTAT TCCTGTGGTT
GTCCGTACTA CTGAAAATAT GTTGCGCTTG GTTCCTGGAA GTTTGAGGGA GGCTGCTTAT
GCATTAGGCA CTCCAAAATG GAAGGTGGCC TTTATGGTTA CCTTGCGCGC AGCGCAAAGC
GGCATCATGA CGGGAATCCT ATTGGCATTA GCTCGAGTGA GTGGTGAAAC TGCGCCTTTG
CTTTTCACAG CCTTGAGCAA TCAGTTCTTC TCAACGGATA TGAATAAGCC CATGGCTAAC
TTGCCGGTGG TTATTTTTCA GTTCGCCATG AGTCCATACG ATAACTGGGT CAGTCTGGCC
TGGGGCGGAT CCCTTCTGAT TACATTTGCT GTGCTTGGCT TAAATATCTT AGCTCGCGTG
GTGTTTAGAG AGAAGGTACA GGGATGA
|
|---|
| Protein sequence | MSVSNNFDMA VFARRKRVNK IGLALSMLAM AIGMASLIWI LSILFIKGFS AINLNMFTAS
TPAPGTEGGG LANAIVGSLL LVGSCTFIST PVGVLAGLYL SEYGDRSKVA SLTRFVTDIM
LSAPSIVIGL FVYALYVAKV QHFSGWAGTV ALALIAIPVV VRTTENMLRL VPGSLREAAY
ALGTPKWKVA FMVTLRAAQS GIMTGILLAL ARVSGETAPL LFTALSNQFF STDMNKPMAN
LPVVIFQFAM SPYDNWVSLA WGGSLLITFA VLGLNILARV VFREKVQG
|
|---|
| |