Gene Pnuc_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1583 
Symbol 
ID5053815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1653507 
End bp1654412 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content45% 
IMG OID640471756 
Producthypothetical protein 
Protein accessionYP_001156361 
Protein GI145589764 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.60862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAA AGCATAAGGA AATGGCCGAG TGGTATCGCC GTGCTCAAGA AGAGATTCTG 
GATAGCATGG ATGAAGAGCT TGAAATGGAG CTCGATGATG ATCGCCTAAC GCCTGATGGT 
GACAGCCAGT CAGAAATTCC ACGCAATGTT TACTTCCGAG AGCTGTTTAG GCTTCAAGGC 
GAATTAGTAA AGCTTCAAGA CTGGGTGGTC GAGAATAAAC TTAAGGTTGC TGTCCTATTT 
GAAGGTCGAG ATTCTGCTGG TAAGGGTGGG GCAATTAAGC GAATTACTCA GCGACTCAAT 
CCCCGCGTGT GTAAGGTCGT GGCTTTGCCC GCTCCAAATG AGCGCGAGAA AACTCAGTGG 
TATTTCCAAA GATATATTTC TCATTTGCCC GCCGGTGGCG AAATCGTTCT ATTTGATCGC 
AGTTGGTATA ACCGTGCTGG GGTTGAGAAG GTCATGGGAT TTTGTACTGA CTATGAATAT 
GAAGAGTTTT TAAGAACGGT TCCTGATCTT GAGCGAATGA TGATTAGTTC CGGAGTTATC 
TTAATTAAGT ATTGGTTCTC TATTTCAGAT GACGAGCAAT ACAACCGCTT CATGATGCGT 
ATTCATGATC CGTTGAAGCA ATGGAAATTA AGCCCAATGG ATTTAGAGGC TAGAAGGCTT 
TGGGAGGCTT ACACCAAGGC CAAGGAAACT ATGCTTGAGC GTACGTCTAT TCCAGAGGCT 
CCATGGTGGG TTGTTGCTGC AAATGATAAG AAAAAAGCGC GTTTGAACTG CATTACCCAT 
TTACTGAATC AAATACCGTA TCAAGAAATT GATCATCCGG TAATTACTTT GCCTAAACGC 
GTGCATAACC CAGACTATCT ACGCGGACCG GTTCCTCCAG AGATGTATGT CCCTGAGGTT 
TTCTAA
 
Protein sequence
MTSKHKEMAE WYRRAQEEIL DSMDEELEME LDDDRLTPDG DSQSEIPRNV YFRELFRLQG 
ELVKLQDWVV ENKLKVAVLF EGRDSAGKGG AIKRITQRLN PRVCKVVALP APNEREKTQW 
YFQRYISHLP AGGEIVLFDR SWYNRAGVEK VMGFCTDYEY EEFLRTVPDL ERMMISSGVI 
LIKYWFSISD DEQYNRFMMR IHDPLKQWKL SPMDLEARRL WEAYTKAKET MLERTSIPEA 
PWWVVAANDK KKARLNCITH LLNQIPYQEI DHPVITLPKR VHNPDYLRGP VPPEMYVPEV 
F