Gene Pnuc_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1571 
Symbol 
ID5052470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1643718 
End bp1644368 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID640471744 
Productparaquat-inducible protein A 
Protein accessionYP_001156349 
Protein GI145589752 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACCG GCGCCTCTCG CGGAATAATA GGGTGTGATA CTTGTGGCCT TGCTCAACGG 
GAAGCTCCCG AGGGTCCACA TATGGAGTGT GCACGCTGTG GCGCTGATAT GCATATACGT 
AAGCCCGATA GCATTACCCG CACCTGGGCA TTAGTCATCG CAGCCTATGT ATTGATTATT 
CCAGCCAATT TGATGCCAGT AATGGCTACT GGCTCTCTCT TTGGCACCGA AAAAGATACG 
ATTTTTGGCG GGGTGGTGTA TTTGTGGACT TCAGACTCAC AGGTGCTAGC TATCATCCTA 
TTTTGCGCCA GTATCATCAT CCCATTCGCC AAGTTATTTT CTTTAACTTT CCTCTTGATT 
TCAGTGCAAT TACGCTCGAC CTGGAAACCT AGAATGCGTG CGAAACTCTA TCGTATGGTG 
GAGGCAATCG GGCGCTGGTC GATGATTGAT GTCTATGTTG CTACTATGCT TACTGCGCTC 
GTACAATTTG GTAACTTAAT GTCGATTCGG GCGGGTGGTG GTGCAATTGC TTTTGCAACA 
GTAGTAGTCC TGACAATTTT TGCTGCAAAG AGTTTTGACC CCCGGATAAT ATGGGATGCC 
GCGGGCCTTT CAAATAATAA CGAGATGATT GCTGAGGAAT TGCATGTCTG A
 
Protein sequence
MITGASRGII GCDTCGLAQR EAPEGPHMEC ARCGADMHIR KPDSITRTWA LVIAAYVLII 
PANLMPVMAT GSLFGTEKDT IFGGVVYLWT SDSQVLAIIL FCASIIIPFA KLFSLTFLLI 
SVQLRSTWKP RMRAKLYRMV EAIGRWSMID VYVATMLTAL VQFGNLMSIR AGGGAIAFAT 
VVVLTIFAAK SFDPRIIWDA AGLSNNNEMI AEELHV