Gene Pnuc_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1569 
Symbol 
ID5053043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1641480 
End bp1642109 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640471742 
Producthypothetical protein 
Protein accessionYP_001156347 
Protein GI145589750 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.849012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTGA TCTTCAGTCC CCTATTGATT TCCTTATTGC TGTGGGGTTG TACCTCTCCT 
AAAACCTCTT ATTACAAGTT AAATGCTGAG CCCATTCCTG TAATGACATC AGTTAGCAAT 
AAGATGCGCA TCATGGTTGG TCCGGTAAGT GTGCCTGCAC GCATGGATCG TCCGCAGCTA 
GTGACTCAAG CTGCTGGTAG TGAAGTAGAG GTGTATGAGT ATCACCGCTG GGCAGGATCT 
CTTAAGGGAG ATGTAGGTAG GGTAATCTCA TCAAACATAG CCCGTAATTT AGGCGCCCCT 
AATGTTTGGA ATTTTGCACA AAGTACCCAA GCTCAATATG ACTACCAAGT ATTGATTGAC 
GTTCAAAATC TAGAGAGCGT ACAAGACGGC GATGTTGTAG TGGATGTATT GTGGACTATT 
AAGCCTTCAG CACCGGTTAT AAAAAATCAA GCTCAAAGCG CCCGAACTAA GTGTGTACCA 
CAAGAAATTA TGGGTCGTTC TTTGGTGCGT GAACCAGTTT CTGGAAGCGG TTTTGATGCC 
TTATTAAGCG CACAAAGCCG CGCCTTTTCT AAGGTGGGCG ATGATATTGC TAGGCGATTC 
AGTGAAAGCG AATGTCGATC ACCTACATAA
 
Protein sequence
MRLIFSPLLI SLLLWGCTSP KTSYYKLNAE PIPVMTSVSN KMRIMVGPVS VPARMDRPQL 
VTQAAGSEVE VYEYHRWAGS LKGDVGRVIS SNIARNLGAP NVWNFAQSTQ AQYDYQVLID 
VQNLESVQDG DVVVDVLWTI KPSAPVIKNQ AQSARTKCVP QEIMGRSLVR EPVSGSGFDA 
LLSAQSRAFS KVGDDIARRF SESECRSPT