Gene Pnuc_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1558 
Symbol 
ID5052912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1629884 
End bp1630660 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content46% 
IMG OID640471731 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001156336 
Protein GI145589739 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTACG AAAATATTAT CGTTGCTAAA CATGGCAAAG TTGCTCTCAT CACACTCAAT 
CGCCCAAAGG CATTGAATGC ATTGAGCCCC GATCTCACTC GTGAATTGGG GGAGGCCCTT
GATGTTCTCG AGATAGATCC AACAGTTGCG GCTGTCGTAT TAACTGGTAG TGAAAAAGCA
TTTGCGGCTG GTGCCGATAT TAAGGTCATG AAAGACTGGT CTTACATGGA TGTCTATAGT
GCTAACTTTA TTACTGCTAC CTGGGAGCGC ATTGCTAAGT TTCGCAAGCC AACCATTGCT
GCAGTAGCGG GTTATGCACT GGGTGGTGGT TGCGAGTTAG CGATGATGTG TGATTTTATT
ATTGCAGCGG ATAATGCTAA ATTTGGTCAA CCTGAAATTA CTATTGGTAC GATTCCAGGG
GCTGGTGGTA CACAGCGTTT AACCCGTCTC ATTGGTAAAT CCAAGGCGAT GGAAATGGTG
TTGACTGGCC GCATGATGGA TGCTGTCGAG GCTGAGAGGG CTGGCTTAGT AACGCGCATT
GTTCCTGCTG ATCAACTCAT ATCCGATGCC TTGAAAACTG CAGAGAAGAT TGCCTCGATG
TCTATGCCCA TTGCGATGAT GGCGAAGGAT GCTGTGAATA GGGCGTATGA AGTTTCATTA
AGCGAAGGCA TTCATTTCGA ACGACGTCTC TTCCACTCGA CTTTCGCCAC CGAAGATCAA
AAAGAAGGTA TGAACGCTTT CTCAGAAAAA CGTCCACCAG TATTTAAAGA TAAATAA
 
Protein sequence
MTYENIIVAK HGKVALITLN RPKALNALSP DLTRELGEAL DVLEIDPTVA AVVLTGSEKA 
FAAGADIKVM KDWSYMDVYS ANFITATWER IAKFRKPTIA AVAGYALGGG CELAMMCDFI
IAADNAKFGQ PEITIGTIPG AGGTQRLTRL IGKSKAMEMV LTGRMMDAVE AERAGLVTRI
VPADQLISDA LKTAEKIASM SMPIAMMAKD AVNRAYEVSL SEGIHFERRL FHSTFATEDQ
KEGMNAFSEK RPPVFKDK