Gene Pnuc_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1547 
Symbol 
ID5053502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1616628 
End bp1617497 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content44% 
IMG OID640471720 
Producthypothetical protein 
Protein accessionYP_001156325 
Protein GI145589728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.190164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTCAC CAATCTTCTT GTTTATCTTG AGTGGGATTT GTTTTTCTAC TGTAGATGCC 
ATCGCCAAGA TTCTCGTTCA AGATACCAAT CTCATTGCAG TAGTATGGTC TCGATTTTTT 
GGTCAGCTAT TACTCGCAGC TCCAATTGCA TGGTATTTCC TAGGCAAAGA TTTTTGGCGC 
ACCCATCATT TGGGTCTACA GCTATTTAGA TCCTGTTTAT TAGTTGCCTC TGCCACTTTA 
TTTTTTGCGG GGCTTAATTG GTTGCCATTA GCAGAAGCAT CCTCAATTAC CTTTACTGCG 
CCAATTTGGG TAGCAATTCT ATCGGGCCCA ATGCTGGGTG AGCGTGTTGG TTTAAAGGAA 
TGGTTGGTCG CTGGAATTGG ATTCTTAGGA ATCCTTTTTA TTGCCAGACC AGGATCTGCA 
ATTTTTCATT TGGCAGCTTT GTTGCTTGTG ATGATGGCAT TTCTCAATGC GATCTTTCAG 
CTCTATACCC GAAAGCTCAT CCGGGATTCG GCATACACCA CGTTTTTTTA CAGTGGCATC 
GTTGGCCTCA TTGTCTCTAC CGCCTTGCTT CCTTATTCCG ATCCACTACC GACTTTGCCT 
GTATACGAAT ATGTTTTATT TGGATTGTTA GGCTTCTTAG GCGGTCTTGC CCACTTACTT 
GTCGTGCTGG CCTTCTATCA AATGCGCCCA TACAAACTCA CCCCCCTAGT CTTTTTGCAA 
TTGATTTGGG CGGTAGGTTA TGGCTACCTC ATTTTTGGAC AGCTGCCAGA TAGACTAAGC 
GTGGTTGGCA TGATTCTCAT TGCTGCATCA GGTATCTGGC TAATCTGGAA TCATCGCTCT 
ACAGGCATAG AGGATCCCAA TAAGGTTTAG
 
Protein sequence
MNSPIFLFIL SGICFSTVDA IAKILVQDTN LIAVVWSRFF GQLLLAAPIA WYFLGKDFWR 
THHLGLQLFR SCLLVASATL FFAGLNWLPL AEASSITFTA PIWVAILSGP MLGERVGLKE 
WLVAGIGFLG ILFIARPGSA IFHLAALLLV MMAFLNAIFQ LYTRKLIRDS AYTTFFYSGI 
VGLIVSTALL PYSDPLPTLP VYEYVLFGLL GFLGGLAHLL VVLAFYQMRP YKLTPLVFLQ 
LIWAVGYGYL IFGQLPDRLS VVGMILIAAS GIWLIWNHRS TGIEDPNKV