| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1535 |
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| Symbol | |
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| ID | 5053670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1603971 |
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| End bp | 1605551 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471708 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001156313 |
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| Protein GI | 145589716 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000673423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATA CCAATCTCAA AACCCAATTA AAAGCGTACT TCGAAAAGAT CGTAGATCCG
ATCACTCTTG TAGCTAGCTT AGATAGCAGC CCTTCCTCAG CGCAAATGCT TGAACTCCTC
ACTGAAGTTG CTGAGCAGTC TGAGAAGATC ACCCTCCAAA CAGATGGTAA GAGCGGCCAT
GTTCCGAGTT TTACTGTTGG CAAGTCTGGT AGTGATGCGC GCATTACCTT TTCTGGATTG
CCAATGGGTC ATGAAATGAC CTCTTTCATC CTAGCAATTT TGCAAGCCAG TGGTTACCCA
CCAAAAGTTG AAGAAGATGT TATTGCACGC ATTAAGACTT TGAATGGTCA ATTTAAGTTT
CAGACATTTA TTTCCTTGTC ATGCCATAAC TGTCCAGATG TTGTGCAAGC CCTCAATCTC
ATGGCTGCAT TAAATCCACA GATTGAACAT GAAATGATTG ATGGCGCCCT CTTTCAGGGT
CTAGTAGATC AATATCAAAT TATGGCCGTA CCAACCGTCA TTCTCAATGG TGAAGTATTC
GGCCAAGGCA GAATGGGCGT AGAAGAAATT GTTGCCAAAC TCGATACTGG AAGCTCAGAG
GAAGAGGCCG CCAAACTCAA TGCCAAAGAT AGCTTTGATG TTCTCGTCAT TGGCGGTGGC
CCTGCTGGAT CTGCTGCCGC TATTTATGCT GCTCGTAAAG GTATTCGCAC CGGTATCGTT
GCTGAGCGTT TTGGTGGCCA GGTAATGGAT ACCTTAGGAA TTGAAAACTT TATCTCTGTT
TCGCACACAG AAGGTCCTAA GCTTGTTCAG GCTTTAGAGC AACACGTCAA GAGTTACGAA
GTTGACATTA TGAATCTGCA GCGCGCTAAT GCACTGCGTA AGACCGCTAA CGGGATTGAA
GTTGAGTTAG CAAACGGCGC AGTGTTAAAT AGCAAGTCCG TTATCTTAAG CACTGGCGCA
CGCTGGAGAG AGATGAATGT TCCTGGTGAA CAAGAATATC GCAACAAAGG GGTTGCTTAT
TGCCCGCATT GCGATGGACC ACTCTTTAAA GGTAAACGTG TTGCCGTAAT CGGCGGCGGA
AATTCTGGTG TAGAAGCAGC TATTGACCTC GCCGGTCTAG TAAGTCACGT TACCCTCATT
GAATTTGACA GTCAGCTTCG CGCAGACGCT GTATTGCAAG TAAAACTAGC TAGCCTACCG
AATGTGACCG TTATCAAGAG CGCCCTCACT AAAGAAGTAT TGGGTGACGG CAGTAAAGTA
AATGGCTTGC GCTATCAAGA TCGCATCAGC AATGAAGAGC ATGCAATTGA ACTAGAAGGT
ATCTTCGTAC AAATCGGTTT ATTGCCAAAC ACTGAGTGGT TAAAAGGTGC TGTTGAACTC
TCACCACGTG GTGAGGTGAT GGTTGATGCC AAAGGCGAAA CCTCTGTTCC CGGTATATTT
GCAGCCGGCG ATTGCACTAC CGTTCCTTAC AAGCAAATCA TTATTGCAAT GGGTGAAGGT
GCAAAAGCAT CATTAGGAGC ATTTGATTAC CTCATCCGCC ATTCTGTAAG CGAAGAGGCT
CCGGTAAAAG TGGCAGCTTA A
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| Protein sequence | MLDTNLKTQL KAYFEKIVDP ITLVASLDSS PSSAQMLELL TEVAEQSEKI TLQTDGKSGH
VPSFTVGKSG SDARITFSGL PMGHEMTSFI LAILQASGYP PKVEEDVIAR IKTLNGQFKF
QTFISLSCHN CPDVVQALNL MAALNPQIEH EMIDGALFQG LVDQYQIMAV PTVILNGEVF
GQGRMGVEEI VAKLDTGSSE EEAAKLNAKD SFDVLVIGGG PAGSAAAIYA ARKGIRTGIV
AERFGGQVMD TLGIENFISV SHTEGPKLVQ ALEQHVKSYE VDIMNLQRAN ALRKTANGIE
VELANGAVLN SKSVILSTGA RWREMNVPGE QEYRNKGVAY CPHCDGPLFK GKRVAVIGGG
NSGVEAAIDL AGLVSHVTLI EFDSQLRADA VLQVKLASLP NVTVIKSALT KEVLGDGSKV
NGLRYQDRIS NEEHAIELEG IFVQIGLLPN TEWLKGAVEL SPRGEVMVDA KGETSVPGIF
AAGDCTTVPY KQIIIAMGEG AKASLGAFDY LIRHSVSEEA PVKVAA
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